RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 HSPBP1Q9NZL4 362 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 RCOR1Q9UKL0 485 aa24.05■■□□□ 1.44
CASC3-207ENST00000581849 NUP210Q8TEM1 1887 aaPredicted RBP24.04■■□□□ 1.44
CASC3-207ENST00000581849 FAM170BA6NMN3 283 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 MAN2B1O00754 1011 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 HAPLN1P10915 354 aaPredicted RBP24.04■■□□□ 1.44
CASC3-207ENST00000581849 ATF6P18850 670 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 GRM2Q14416 872 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 UBXN2BQ14CS0 331 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 GAREM2Q75VX8 874 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 DPH6Q7L8W6 267 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 HPS3Q969F9 1004 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 CLDN23Q96B33 292 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 MTMR12Q9C0I1 747 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 ZNF334Q9HCZ1 680 aaPredicted RBP24.04■■□□□ 1.44
CASC3-207ENST00000581849 ABCB6Q9NP58 842 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 OBP2AQ9NY56 170 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 CGNQ9P2M7 1197 aaKnown RBP24.04■■□□□ 1.44
CASC3-207ENST00000581849 SIX4Q9UIU6 781 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 L1RE1Q9UN81 338 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 PCDHB5Q9Y5E4 795 aa24.04■■□□□ 1.44
CASC3-207ENST00000581849 F5P12259 2224 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 GABRR2P28476 465 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 CDC25CP30307 473 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 VIPR2P41587 438 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 RPS9P46781 194 aaKnown RBP24.03■■□□□ 1.44
CASC3-207ENST00000581849 MYL7Q01449 175 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 MYO1EQ12965 1108 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 BMT2Q1RMZ1 405 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 ARHGAP15Q53QZ3 475 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 ASCL5Q7RTU5 278 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 WDR49Q8IV35 697 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 FAM200AQ8TCP9 573 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 MSANTD3Q96H12 275 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 MKNK1Q9BUB5 465 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 ATXN3LQ9H3M9 355 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 HEBP1Q9NRV9 189 aa24.03■■□□□ 1.44
CASC3-207ENST00000581849 R3HCC1Q9Y3T6 440 aaKnown RBP24.03■■□□□ 1.44
CASC3-207ENST00000581849 CACNA1IQ9P0X4 2223 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 RIF1Q5UIP0 2472 aaKnown RBP24.02■■□□□ 1.44
CASC3-207ENST00000581849 FANCMQ8IYD8 2048 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 HEPACAM2A8MVW5 462 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 ZNF263O14978 683 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 SOAT2O75908 522 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 TNNC2P02585 160 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 GDI1P31150 447 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 LHX1P48742 406 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 FCHO2Q0JRZ9 810 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 BFSP1Q12934 665 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 PKP1Q13835 747 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 DUOXA2Q1HG44 320 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 C1orf228Q6PIY5 440 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 ZC3H14Q6PJT7 736 aaKnown RBP24.02■■□□□ 1.44
CASC3-207ENST00000581849 HS2ST1Q7LGA3 356 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 CBWD2Q8IUF1 395 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 NOC3LQ8WTT2 800 aaKnown RBP24.02■■□□□ 1.44
CASC3-207ENST00000581849 SCFD1Q8WVM8 642 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 GCNAQ96QF7 691 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 IL21Q9HBE4 155 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 AGPAT3Q9NRZ7 376 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 DDX43Q9NXZ2 648 aaKnown RBP24.02■■□□□ 1.44
CASC3-207ENST00000581849 ABI2Q9NYB9 513 aaPredicted RBP24.02■■□□□ 1.44
CASC3-207ENST00000581849 FBXO4Q9UKT5 387 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 PATJQ8NI35 1801 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 FAM186AA6NE01 2351 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 COL4A3Q01955 1670 aa24.02■■□□□ 1.44
CASC3-207ENST00000581849 SHISA7A6NL88 538 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 SOBPA7XYQ1 873 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 ARNTLO00327 626 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 GABRDO14764 452 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 CHADO15335 359 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 TGFB1I1O43294 461 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 LRRN2O75325 713 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 PRPF40AO75400 957 aaKnown RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 KRT19P08727 400 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 TARSP26639 723 aaKnown RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 DNM1Q05193 864 aaKnown RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 TAF12Q16514 161 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 ZNF528Q3MIS6 628 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 FOXD4L6Q3SYB3 417 aaPredicted RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 INTS6LQ5JSJ4 861 aaKnown RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 FOXD4L3Q6VB84 417 aaPredicted RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 ARID3BQ8IVW6 561 aaPredicted RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 C12orf56Q8IXR9 622 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 LPIN3Q9BQK8 851 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 IER2Q9BTL4 223 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 TASP1Q9H6P5 420 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 MTF2Q9Y483 593 aaPredicted RBP24.01■■□□□ 1.43
CASC3-207ENST00000581849 SNX9Q9Y5X1 595 aa24.01■■□□□ 1.43
CASC3-207ENST00000581849 SP9P0CG40 484 aa24■■□□□ 1.43
CASC3-207ENST00000581849 PCSK1P29120 753 aa24■■□□□ 1.43
CASC3-207ENST00000581849 SNRNP35Q16560 246 aaKnown RBP24■■□□□ 1.43
CASC3-207ENST00000581849 GPR158Q5T848 1215 aa24■■□□□ 1.43
CASC3-207ENST00000581849 LIMS2Q7Z4I7 341 aa24■■□□□ 1.43
CASC3-207ENST00000581849 YAF2Q8IY57 180 aa24■■□□□ 1.43
CASC3-207ENST00000581849 CEP57L1Q8IYX8 460 aa24■■□□□ 1.43
CASC3-207ENST00000581849 ADGRF2Q8IZF7 708 aa24■■□□□ 1.43
CASC3-207ENST00000581849 PKMYT1Q99640 499 aa24■■□□□ 1.43
CASC3-207ENST00000581849 MYO15AQ9UKN7 3530 aa24■■□□□ 1.43
CASC3-207ENST00000581849 PTPRZ1P23471 2315 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms