RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ENGP17813 658 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 GJA4P35212 333 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 AVPR1AP37288 418 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 CDR1P51861 262 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 BFSP1Q12934 665 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 SEMA3BQ13214 749 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 RASSF3Q86WH2 238 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 KIFAP3Q92845 792 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 EXOC4Q96A65 974 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 SEPT5Q99719 369 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 ANKFY1Q9P2R3 1169 aa13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 TNRC6BQ9UPQ9 1833 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-218ENST00000581655 EIF4E1BA6NMX2 242 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 CCDC169A6NNP5 214 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 ABLIM1O14639 778 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 ATF6P18850 670 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 KRT2P35908 639 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 AARSP49588 968 aaKnown RBP eCLIP13.67□□□□□ -0.225e-7■■■■■ 34.9
CSNK1D-218ENST00000581655 FAM193AP78312 1265 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 SPAG1Q07617 926 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 TAF12Q16514 161 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 MGAT5BQ3V5L5 792 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 OVOS1Q6IE37 1185 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 CC2D1AQ6P1N0 951 aaPredicted RBP13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 MPZL3Q6UWV2 235 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 ARMCX6Q7L4S7 300 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 TAS1R3Q7RTX0 852 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 GIPC2Q8TF65 315 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 CD101Q93033 1021 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 ZBTB45Q96K62 511 aaPredicted RBP13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 CNOT6LQ96LI5 555 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 KIF9Q9HAQ2 790 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 TMEM74BQ9NUR3 256 aa13.67□□□□□ -0.22
CSNK1D-218ENST00000581655 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 ANK1P16157 1881 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 UPK3BL1B0FP48 263 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 UPK3BL2E5RIL1 263 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 CDKL5O76039 1030 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 PROZP22891 400 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 NMT1P30419 496 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 LRPAP1P30533 357 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 PEX3P56589 373 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 SCRN1Q12765 414 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 PDGFRLQ15198 375 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 TTC30AQ86WT1 665 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 SYT12Q8IV01 421 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 CPA6Q8N4T0 437 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 RLN3Q8WXF3 142 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 TMEM134Q9H6X4 195 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 ECT2Q9H8V3 914 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 FSCN3Q9NQT6 498 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 TDP1Q9NUW8 608 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 ZMYM5Q9UJ78 669 aa13.66□□□□□ -0.22
CSNK1D-218ENST00000581655 ATXN2Q99700 1313 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 OBSL1O75147 1896 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 ANTXRLA6NF34 631 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 TNFRSF10BO14763 440 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 TYMPP19971 482 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 RPA1P27694 616 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 PTGER3P43115 390 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 NPTX2P47972 431 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 ZNF423Q2M1K9 1284 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 SLC23A3Q6PIS1 610 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 LPCAT2Q7L5N7 544 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 TMEM150AQ86TG1 271 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 TMEFF1Q8IYR6 380 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 HDDC3Q8N4P3 179 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 HNRNPLLQ8WVV9 542 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 GTPBP2Q9BX10 602 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 CCDC86Q9H6F5 360 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 ARHGAP28Q9P2N2 729 aa13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 MBD1Q9UIS9 605 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-218ENST00000581655 PLXNB3Q9ULL4 1909 aa13.64□□□□□ -0.23
CSNK1D-218ENST00000581655 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
CSNK1D-218ENST00000581655 CFIP05156 583 aa13.64□□□□□ -0.23
CSNK1D-218ENST00000581655 CXCL8P10145 99 aa13.64□□□□□ -0.23
CSNK1D-218ENST00000581655 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms