RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 KIAA0355O15063 1070 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 EN2P19622 333 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 SERPINB3P29508 390 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 ZEB1P37275 1124 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 ZNF135P52742 658 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 ARFIP2P53365 341 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 HABP2Q14520 560 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 C3orf38Q5JPI3 329 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 OLFML1Q6UWY5 402 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 USP37Q86T82 979 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 SESTD1Q86VW0 696 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 SKAP1Q86WV1 359 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 PDSS2Q86YH6 399 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 TMIEQ8NEW7 156 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 OR6B3Q8NGW1 331 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 GJA10Q969M2 543 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 SUCLG2Q96I99 432 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 CCDC138Q96M89 665 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 KLHL32Q96NJ5 620 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 PSMD1Q99460 953 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 BTBD1Q9H0C5 482 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 NLRC4Q9NPP4 1024 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 FNIP2Q9P278 1114 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 MED16Q9Y2X0 877 aa5.76□□□□□ -1.49
SMCHD1-205ENST00000581383 MASP2O00187 686 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 TPD52L2O43399 206 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 TBC1D4O60343 1298 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 LDHAP00338 332 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 ANXA1P04083 346 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 HKR1P10072 659 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 RPL17P18621 184 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 PROZP22891 400 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 DDX6P26196 483 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 PTTG1IPP53801 180 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 NOMO2Q5JPE7 1267 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 TSHZ3Q63HK5 1081 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 ZNF783Q6ZMS7 281 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 SCAMP4Q969E2 229 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 GPR35Q9HC97 309 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 TAGLN3Q9UI15 199 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 MAP3K2Q9Y2U5 619 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 NOX1Q9Y5S8 564 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 HS3ST4Q9Y661 456 aa5.75□□□□□ -1.49
SMCHD1-205ENST00000581383 F8W8V4 182 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 UNC5CO95185 931 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 CKBP12277 381 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 CD38P28907 300 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 ADRA1BP35368 520 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 HTR3AP46098 478 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 TM4SF4P48230 202 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 CASP5P51878 434 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 COL10A1Q03692 680 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 ZNF543Q08ER8 600 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 RESTQ13127 1097 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 SLC13A2Q13183 592 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 CTBP1Q13363 440 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 Q6YL49 198 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 ADGRG3Q86Y34 549 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 LIX1LQ8IVB5 337 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 ARHGEF19Q8IW93 802 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 ACRBPQ8NEB7 543 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 MARS2Q96GW9 593 aaKnown RBP5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 RIPOR3Q96MK2 946 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 TLR10Q9BXR5 811 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 TINAGL1Q9GZM7 467 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 ADARB2Q9NS39 739 aaKnown RBP5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 AFF4Q9UHB7 1163 aaKnown RBP5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 AGAP1Q9UPQ3 857 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 DMTF1Q9Y222 760 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 FPGT-TNNI3KV9GXZ4 949 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 SPATA31A6Q5VVP1 1343 aa5.74□□□□□ -1.49
SMCHD1-205ENST00000581383 GRID2IPA4D2P6 1211 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 POM121BA6NF01 834 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 M0QYG6 137 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 DNAJB5O75953 348 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 ITGAMP11215 1152 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 CXCR5P32302 372 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 SLFN5Q08AF3 891 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 MORC3Q14149 939 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 PDCD4Q53EL6 469 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 C10orf62Q5T681 223 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 FAM102AQ5T9C2 384 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 METRNLQ641Q3 311 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 XRRA1Q6P2D8 792 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 DPP9Q86TI2 863 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 SPICE1Q8N0Z3 855 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 MPP5Q8N3R9 675 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 SLC15A4Q8N697 577 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 PDPRQ8NCN5 879 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 NUP133Q8WUM0 1156 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 MAML1Q92585 1016 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 NEU1Q99519 415 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 SMURF2Q9HAU4 748 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 PNPLA8Q9NP80 782 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 MRPS18AQ9NVS2 196 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 CDYLQ9Y232 598 aa5.73□□□□□ -1.49
SMCHD1-205ENST00000581383 AATKQ6ZMQ8 1374 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 TMEM200CA6NKL6 621 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 RASA4BC9J798 803 aa5.72□□□□□ -1.49
SMCHD1-205ENST00000581383 E9PLN8 166 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms