RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 LHX1P48742 406 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 CYP2J2P51589 502 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 GPC5P78333 572 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 MYL7Q01449 175 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 NHLH1Q02575 133 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 CYP24A1Q07973 514 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 STK4Q13043 487 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
PSMD3-205ENST00000580980 PHLDB3Q6NSJ2 640 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
PSMD3-205ENST00000580980 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 FLCNQ8NFG4 579 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 OR5B17Q8NGF7 314 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 PSMG2Q969U7 264 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
PSMD3-205ENST00000580980 SYAP1Q96A49 352 aaPredicted RBP13.09□□□□□ -0.31
PSMD3-205ENST00000580980 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 SHDQ96IW2 340 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 NOTCH4Q99466 2003 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 LRRC3Q9BY71 257 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 PCDHB5Q9Y5E4 795 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 SNX9Q9Y5X1 595 aa13.09□□□□□ -0.31
PSMD3-205ENST00000580980 KMT2EQ8IZD2 1858 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 PDXKO00764 312 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 GABRDO14764 452 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 EXOC3O60645 756 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 FAM163BP0C2L3 166 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 HAPLN1P10915 354 aaPredicted RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TNNI1P19237 187 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 AP3M2P53677 418 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 STARD6P59095 220 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 PRKCQQ04759 706 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TCF15Q12870 199 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 MGAT5BQ3V5L5 792 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 INTS6LQ5JSJ4 861 aaKnown RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 LMBRD2Q68DH5 695 aaPredicted RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TANGO2Q6ICL3 276 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 POTEHQ6S545 545 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 RBM43Q6ZSC3 357 aaKnown RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 LIMS2Q7Z4I7 341 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TMC8Q8IU68 726 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 SLC9A9Q8IVB4 645 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 ASB16Q96NS5 453 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 CGRRF1Q99675 332 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 SEPT5Q99719 369 aaPredicted RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TRPV4Q9HBA0 871 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 ZFP14Q9HCL3 533 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 DDX43Q9NXZ2 648 aaKnown RBP13.08□□□□□ -0.32
PSMD3-205ENST00000580980 CA14Q9ULX7 337 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 TSC2P49815 1807 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 SCN1AP35498 2009 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 PTPRJQ12913 1337 aa13.08□□□□□ -0.32
PSMD3-205ENST00000580980 DOCK6Q96HP0 2047 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 STK25O00506 426 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 RPN1P04843 607 aaKnown RBP13.07□□□□□ -0.32
PSMD3-205ENST00000580980 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
PSMD3-205ENST00000580980 RFX1P22670 979 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 FCARP24071 287 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 PCSK1P29120 753 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
PSMD3-205ENST00000580980 TEAD2Q15562 447 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 SOWAHAQ2M3V2 549 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 SCARA3Q6AZY7 606 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 ADGRF2Q8IZF7 708 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 TTC9BQ8N6N2 239 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 DEPDC1BQ8WUY9 529 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 CCDC127Q96BQ5 260 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 FAM84AQ96KN4 292 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 TBC1D17Q9HA65 648 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 DMAC2Q9NW81 257 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 TMEM63CQ9P1W3 806 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 ZMYM5Q9UJ78 669 aa13.07□□□□□ -0.32
PSMD3-205ENST00000580980 A0A1W2PRU2 124 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 PI15O43692 258 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 SOAT2O75908 522 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 STAU1O95793 577 aaKnown RBP13.06□□□□□ -0.32
PSMD3-205ENST00000580980 ATF6P18850 670 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 WEE1P30291 646 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 CDC25CP30307 473 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 ATICP31939 592 aa13.06□□□□□ -0.32
PSMD3-205ENST00000580980 CLDN10P78369 228 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms