RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 YAF2Q8IY57 180 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 HS6ST3Q8IZP7 471 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 DEPDC1BQ8WUY9 529 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 ATOH1Q92858 354 aaPredicted RBP21.62■■□□□ 1.05
SMG8-204ENST00000580498 BORCS6Q96GS4 357 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 TMEM209Q96SK2 561 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 HPSEQ9Y251 543 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 ZDHHC9Q9Y397 364 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 NOTCH4Q99466 2003 aa21.62■■□□□ 1.05
SMG8-204ENST00000580498 DPYSL4O14531 572 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 CALUO43852 315 aaPredicted RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 RPN1P04843 607 aaKnown RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 HOXD13P35453 343 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 WNT7BP56706 349 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 RPL10AP62906 217 aaKnown RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 TNNC1P63316 161 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 MAPRE1Q15691 268 aaKnown RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 LMBRD2Q68DH5 695 aaPredicted RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 DNAJB7Q7Z6W7 309 aaPredicted RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 TMEM105Q8N8V8 129 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 PRSS33Q8NF86 280 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 TCEAL4Q96EI5 215 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 ASB16Q96NS5 453 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 MMS19Q96T76 1030 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 TRMT61BQ9BVS5 477 aaKnown RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 ATXN3LQ9H3M9 355 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 BRD9Q9H8M2 597 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 L1RE1Q9UN81 338 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 FRMD4BQ9Y2L6 1034 aa21.61■■□□□ 1.05
SMG8-204ENST00000580498 MRPS17Q9Y2R5 130 aaKnown RBP21.61■■□□□ 1.05
SMG8-204ENST00000580498 A0A1W2PRU2 124 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 NDUFA8P51970 172 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 TEAD2Q15562 447 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 MLF2Q15773 248 aaPredicted RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 CWF19L1Q69YN2 538 aaKnown RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 C4orf50Q6ZRC1 276 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 TRAPPC11Q7Z392 1133 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 SPATA2LQ8IUW3 424 aaPredicted RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 ST13P5Q8NFI4 369 aaPredicted RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 ZSCAN18Q8TBC5 510 aaPredicted RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 DNASE1L2Q92874 299 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 IRF7Q92985 503 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 RPP25Q9BUL9 199 aaKnown RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 ABCB6Q9NP58 842 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 UXTQ9UBK9 157 aaPredicted RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 HOOK1Q9UJC3 728 aaKnown RBP21.6■■□□□ 1.05
SMG8-204ENST00000580498 SIT1Q9Y3P8 196 aa21.6■■□□□ 1.05
SMG8-204ENST00000580498 FAM237AA0A1B0GTK4 181 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 KRBA1A5PL33 1030 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 NCAM2O15394 837 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 CSH1P0DML2 217 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 CSH2P0DML3 217 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 HAPLN1P10915 354 aaPredicted RBP21.59■■□□□ 1.05
SMG8-204ENST00000580498 PSMC3P17980 439 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 GABRR2P28476 465 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 BIRC3Q13489 604 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 SLC44A4Q53GD3 710 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 INTS6LQ5JSJ4 861 aaKnown RBP21.59■■□□□ 1.05
SMG8-204ENST00000580498 FAM78AQ5JUQ0 283 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 OR5B17Q8NGF7 314 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 SYAP1Q96A49 352 aaPredicted RBP21.59■■□□□ 1.05
SMG8-204ENST00000580498 CRISPLD1Q9H336 500 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 SNX25Q9H3E2 840 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 SIX4Q9UIU6 781 aa21.59■■□□□ 1.05
SMG8-204ENST00000580498 PDXKO00764 312 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 KLRC4O43908 158 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 VNN2O95498 520 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 TRIM21P19474 475 aaKnown RBP21.58■■□□□ 1.05
SMG8-204ENST00000580498 ATICP31939 592 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 CCR2P41597 374 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 STK4Q13043 487 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 SNW1Q13573 536 aaKnown RBP21.58■■□□□ 1.05
SMG8-204ENST00000580498 TANGO2Q6ICL3 276 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 KRBA2Q6ZNG9 492 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 CCDC105Q8IYK2 499 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 SHKBP1Q8TBC3 707 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 FUBP3Q96I24 572 aaKnown RBP eCLIP21.58■■□□□ 1.05
SMG8-204ENST00000580498 NELL2Q99435 816 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 DNAJC25Q9H1X3 360 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 CDH9Q9ULB4 789 aa21.58■■□□□ 1.05
SMG8-204ENST00000580498 ZNF263O14978 683 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 ZNF202O95125 648 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 FAM163BP0C2L3 166 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 P4HA1P13674 534 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 NPR3P17342 541 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 RPL13P26373 211 aaKnown RBP21.57■■□□□ 1.04
SMG8-204ENST00000580498 MAGEA9P43362 315 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 STARD6P59095 220 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 GPR158Q5T848 1215 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 TMC8Q8IU68 726 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 SLC9A9Q8IVB4 645 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 TTC9BQ8N6N2 239 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 DTWD2Q8NBA8 298 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 CSGALNACT1Q8TDX6 532 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 PI4K2AQ9BTU6 479 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 TRPV4Q9HBA0 871 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 RMND1Q9NWS8 449 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 EHD2Q9NZN4 543 aa21.57■■□□□ 1.04
SMG8-204ENST00000580498 KANSL1LA0AUZ9 987 aa21.56■■□□□ 1.04
SMG8-204ENST00000580498 MAN2B1O00754 1011 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms