RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FAM124BQ9H5Z6 455 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-218ENST00000580391 PHF24Q9UPV7 400 aa15.74■□□□□ 0.11
CDK5RAP3-218ENST00000580391 KBTBD13C9JR72 458 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 PGRMC1O00264 195 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CALB1P05937 261 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TAF6P49848 677 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CLCN6P51797 869 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TUBB4BP68371 445 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ZNF211Q13398 564 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 RASGEF1CQ8N431 466 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MMGT1Q8N4V1 131 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TTC39CQ8N584 583 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 C12orf29Q8N999 325 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ACTRT1Q8TDG2 376 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 HEXIM2Q96MH2 286 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 SELENOOQ9BVL4 669 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CARD9Q9H257 536 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 LHX5Q9H2C1 402 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MIOSQ9NXC5 875 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 SCINQ9Y6U3 715 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TCRBV5S1A1TA0A578 114 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 KPNA7A9QM74 516 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MIF4GDA9UHW6 222 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 IGFBP6P24592 240 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 LRPAP1P30533 357 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 SCNN1GP51170 649 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MRPS25P82663 173 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MBTPS1Q14703 1052 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 SV2CQ496J9 727 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 DAB2IPQ5VWQ8 1189 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 AADACL2Q6P093 401 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 RNF169Q8NCN4 708 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 KBTBD7Q8WVZ9 684 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ADAM2Q99965 735 aa15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MRPL47Q9HD33 250 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ARL5CA6NH57 179 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ARVCFO00192 962 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CAND2O75155 1236 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 FGFR1P11362 822 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CTNNA1P35221 906 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 PNPLA4P41247 253 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 VSNL1P62760 191 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MTFR1Q15390 333 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 DNAJC24Q6P3W2 148 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MRPL10Q7Z7H8 261 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ACOT1Q86TX2 421 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 OR6B3Q8NGW1 331 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 RNPC3Q96LT9 517 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CPXM1Q96SM3 734 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.114e-16■□□□□ 11
CDK5RAP3-218ENST00000580391 WNT8AQ9H1J5 351 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 DPEP3Q9H4B8 488 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 PARVAQ9NVD7 372 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 GDAP2Q9NXN4 497 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TSPAN16Q9UKR8 245 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 L1RE1Q9UN81 338 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TANC1Q9C0D5 1861 aa15.72■□□□□ 0.11
CDK5RAP3-218ENST00000580391 SCN5AQ14524 2016 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MYO1FO00160 1098 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CTNNA2P26232 953 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 PEX5P50542 639 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 RAB27AP51159 221 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 RPL7AP62424 266 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 CNGA2Q16280 664 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 GOLGA7BQ2TAP0 167 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 UBL4BQ8N7F7 174 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 UBA3Q8TBC4 463 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 MCEEQ96PE7 176 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 LPIN3Q9BQK8 851 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 FAM49BQ9NUQ9 324 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 RAB21Q9UL25 225 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 GIT1Q9Y2X7 761 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 TET1Q8NFU7 2136 aa15.71■□□□□ 0.11
CDK5RAP3-218ENST00000580391 ZNF623O75123 536 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PROSCO94903 275 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 THP07101 528 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GPD2P43304 727 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LILRA4P59901 499 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PDCLQ13371 301 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PPP1R26Q5T8A7 1209 aaPredicted RBP15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 FEZF2Q8TBJ5 459 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LRRC1Q9BTT6 524 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TRAIPQ9BWF2 469 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 AP1M1Q9BXS5 423 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SLC38A7Q9NVC3 462 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ARGLU1Q9NWB6 273 aaPredicted RBP15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TMEM59LQ9UK28 342 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PTPN22Q9Y2R2 807 aa15.71■□□□□ 0.1
CDK5RAP3-218ENST00000580391 A0A0U1RQF3 1178 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 A8MXQ7 604 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 FGGP02679 453 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ERBB2P04626 1255 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ZNF252P-AS1Q0IIN9 211 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PPP1R15BQ5SWA1 713 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LCLAT1Q6UWP7 414 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LIMS2Q7Z4I7 341 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 UNC93AQ86WB7 457 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 OSTM1Q86WC4 334 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 C3orf20Q8ND61 904 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms