RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TPRP12270 2363 aaKnown RBP19.32■□□□□ 0.68
MKS1-209ENST00000580127 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.32■□□□□ 0.68
MKS1-209ENST00000580127 KPNA7A9QM74 516 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 TULP1O00294 542 aaPredicted RBP19.32■□□□□ 0.68
MKS1-209ENST00000580127 PPEF2O14830 753 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 SLC30A4O14863 429 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 SOAT2O75908 522 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 NFICP08651 508 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 BFSP1Q12934 665 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 NFE2Q16621 373 aaPredicted RBP19.32■□□□□ 0.68
MKS1-209ENST00000580127 BRAPQ7Z569 592 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 CMTM8Q8IZV2 173 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 POMGNT1Q8WZA1 660 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 LARP4BQ92615 738 aaKnown RBP19.32■□□□□ 0.68
MKS1-209ENST00000580127 HVCN1Q96D96 273 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 TMX3Q96JJ7 454 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 ZFYVE19Q96K21 471 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 ZNF560Q96MR9 790 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 TMEM209Q96SK2 561 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 ST6GALNAC4Q9H4F1 302 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 CCDC39Q9UFE4 941 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 PCDHB5Q9Y5E4 795 aa19.32■□□□□ 0.68
MKS1-209ENST00000580127 HAPLN1P10915 354 aaPredicted RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 PLCG1P19174 1290 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 NMT1P30419 496 aaKnown RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 GAS6Q14393 721 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 PRR23CQ6ZRP0 262 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 WDR5BQ86VZ2 330 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 TTC9BQ8N6N2 239 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 OR10T2Q8NGX3 314 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 GIPC2Q8TF65 315 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 MRPS31Q92665 395 aaKnown RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 LOXL4Q96JB6 756 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 LPIN3Q9BQK8 851 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 MKNK1Q9BUB5 465 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 SLC46A2Q9BY10 475 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 CCSER1Q9C0I3 900 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 SLC8A2Q9UPR5 921 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 R3HCC1Q9Y3T6 440 aaKnown RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 STYXL1Q9Y6J8 313 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 ZNF638Q14966 1978 aaKnown RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 COL4A2P08572 1712 aa19.31■□□□□ 0.68
MKS1-209ENST00000580127 NUP210Q8TEM1 1887 aaPredicted RBP19.31■□□□□ 0.68
MKS1-209ENST00000580127 TCHHQ07283 1943 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 CCDC163A0A0D9SF12 145 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 ANKRD63C9JTQ0 380 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 K7ESF4 209 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 CSH1P0DML2 217 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 CSH2P0DML3 217 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 RPL10AP62906 217 aaKnown RBP19.3■□□□□ 0.68
MKS1-209ENST00000580127 CYP4F8P98187 520 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 RUNX3Q13761 415 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 CCINQ13939 588 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 KARSQ15046 597 aaKnown RBP19.3■□□□□ 0.68
MKS1-209ENST00000580127 WSCD1Q658N2 575 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 IL31Q6EBC2 164 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 TXNDC11Q6PKC3 985 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 TMEM130Q8N3G9 435 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 LRRC3BQ96PB8 259 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 KIF9Q9HAQ2 790 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 BLOC1S4Q9NUP1 217 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 TDP1Q9NUW8 608 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 ABI2Q9NYB9 513 aaPredicted RBP19.3■□□□□ 0.68
MKS1-209ENST00000580127 UXTQ9UBK9 157 aaPredicted RBP19.3■□□□□ 0.68
MKS1-209ENST00000580127 SEL1LQ9UBV2 794 aa19.3■□□□□ 0.68
MKS1-209ENST00000580127 NCANO14594 1321 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 ANK1P16157 1881 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 HUS1O60921 280 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 LDHAP00338 332 aaKnown RBP19.29■□□□□ 0.68
MKS1-209ENST00000580127 TNK2Q07912 1038 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 ZC2HC1CQ53FD0 456 aaPredicted RBP19.29■□□□□ 0.68
MKS1-209ENST00000580127 SLC39A4Q6P5W5 647 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 Q6ZS52 159 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 ZNF720Q7Z2F6 126 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 CACNA2D4Q7Z3S7 1137 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 FAM160A2Q8N612 972 aaPredicted RBP19.29■□□□□ 0.68
MKS1-209ENST00000580127 MAB21L3Q8N8X9 362 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 CCDC26Q8TAB7 109 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 CNTNAP3BQ96NU0 1288 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 CNTNAP3Q9BZ76 1288 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 SCN1AP35498 2009 aa19.29■□□□□ 0.68
MKS1-209ENST00000580127 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
MKS1-209ENST00000580127 PRAMEF12O95522 483 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 GAP43P17677 238 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 ATF6P18850 670 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 TXLNAP40222 546 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 NLRP12P59046 1061 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 MYL7Q01449 175 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 PDGFRLQ15198 375 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 PPM1JQ5JR12 505 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 MON1AQ86VX9 555 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 TMEM86AQ8N2M4 240 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 CAMKK1Q8N5S9 505 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 C12orf50Q8NA57 414 aaPredicted RBP19.28■□□□□ 0.68
MKS1-209ENST00000580127 ACCSQ96QU6 501 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 FAM83CQ9BQN1 747 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 MRPL44Q9H9J2 332 aaKnown RBP19.28■□□□□ 0.68
MKS1-209ENST00000580127 IL21Q9HBE4 155 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 STK17AQ9UEE5 414 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms