RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 LGALS16A8MUM7 142 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 ABLIM3O94929 683 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 OR4Q2P0C623 313 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 ACAT1P24752 427 aaKnown RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 UBXN1Q04323 297 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 GPR17Q13304 367 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 KCNC3Q14003 757 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 INTS6LQ5JSJ4 861 aaKnown RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 EP400NLQ6ZTU2 488 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 MAFAQ8NHW3 353 aaPredicted RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 TNIP3Q96KP6 325 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 TMEM209Q96SK2 561 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 PLEKHA4Q9H4M7 779 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 CLDND1Q9NY35 253 aa16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 AFF4Q9UHB7 1163 aaKnown RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 BARX2Q9UMQ3 279 aaPredicted RBP16.62■□□□□ 0.25
SLC6A4-205ENST00000579221 WDR27A2RRH5 827 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 SPATA31D3P0C874 917 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 ATF2P15336 505 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 EPCAMP16422 314 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 PTPN1P18031 435 aaKnown RBP16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 CD58P19256 250 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 NDST1P52848 882 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 MFAP3P55082 362 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 FANCCQ00597 558 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 KCNMA1Q12791 1236 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 CTC1Q2NKJ3 1217 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 SLC39A12Q504Y0 691 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 PHLDB3Q6NSJ2 640 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 RNF19BQ6ZMZ0 732 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 SPATA31D4Q6ZUB0 917 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 RRAGAQ7L523 313 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 ENOSF1Q7L5Y1 443 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 APTXQ7Z2E3 356 aaKnown RBP16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 LRRTM3Q86VH5 581 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 KREMEN2Q8NCW0 462 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 RNF214Q8ND24 703 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 C2orf15Q8WU43 125 aaKnown RBP16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 SYT15Q9BQS2 421 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 CISHQ9NSE2 258 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 DZANK1Q9NVP4 752 aa16.61■□□□□ 0.25
SLC6A4-205ENST00000579221 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 LINC01565O15544 149 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 GCNT1Q02742 428 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 ADCY1Q08828 1119 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 INCA1Q0VD86 236 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 COL19A1Q14993 1142 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 UVSSAQ2YD98 709 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 FAM171BQ6P995 826 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 RTL10Q7L3V2 364 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 ARHGEF19Q8IW93 802 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 CRYBG2Q8N1P7 616 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 JAKMIP2Q96AA8 810 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 NT5C1AQ9BXI3 368 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 APEX2Q9UBZ4 518 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 FBXW11Q9UKB1 542 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 GTF3C4Q9UKN8 822 aa16.6■□□□□ 0.25
SLC6A4-205ENST00000579221 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 MYBPHLA2RUH7 354 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 HCRTO43612 131 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 ATP2C2O75185 946 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 CILPO75339 1184 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 UBASH3AP57075 661 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 ANKRD54Q6NXT1 300 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 C4orf50Q6ZRC1 276 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 TCEAL8Q8IYN2 117 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 B3GALNT2Q8NCR0 500 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 VN1R2Q8NFZ6 395 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 SPPL2BQ8TCT7 592 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 HLA-CQ95604 372 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 PGLYRP2Q96PD5 576 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 ARID3AQ99856 593 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 LSM14BQ9BX40 385 aaKnown RBP16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 CYP4F11Q9HBI6 524 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 MAN1C1Q9NR34 630 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 HSFX1Q9UBD0 423 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 COG5Q9UP83 839 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 PCDHB5Q9Y5E4 795 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
SLC6A4-205ENST00000579221 VWA8A3KMH1 1905 aa16.58■□□□□ 0.25
SLC6A4-205ENST00000579221 A0A1B0GTH6 734 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 MTMR11A4FU01 709 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 PRRG1O14668 218 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 GLP2RO95838 553 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 HOXB8P17481 243 aaPredicted RBP16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 TUFMP49411 452 aaKnown RBP16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms