RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NOMO3P69849 1222 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 SLC7A5Q01650 507 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 MTFR1Q15390 333 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 C9orf57Q5W0N0 161 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 PEX26Q7Z412 305 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 RNF169Q8NCN4 708 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 WHAMMQ8TF30 809 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMG8-203ENST00000578922 BTBD6Q96KE9 485 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 RUFY1Q96T51 708 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 C11orf70Q9BRQ4 267 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 NUP85Q9BW27 656 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 ELOVL4Q9GZR5 314 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 ERVK-5Q9HDB9 667 aa21.5■■□□□ 1.03
SMG8-203ENST00000578922 RPLP2P05387 115 aaKnown RBP21.49■■□□□ 1.03
SMG8-203ENST00000578922 AFF1P51825 1210 aaKnown RBP21.49■■□□□ 1.03
SMG8-203ENST00000578922 RAD23BP54727 409 aa21.49■■□□□ 1.03
SMG8-203ENST00000578922 DPH6Q7L8W6 267 aa21.49■■□□□ 1.03
SMG8-203ENST00000578922 MCOLN2Q8IZK6 566 aa21.49■■□□□ 1.03
SMG8-203ENST00000578922 ITGA4P13612 1032 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 MLH1P40692 756 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CENPCQ03188 943 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 PTPN11Q06124 597 aaPredicted RBP21.48■■□□□ 1.03
SMG8-203ENST00000578922 RPS6KA1Q15418 735 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 MS4A14Q96JA4 679 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CACNG4Q9UBN1 327 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 GTF3C4Q9UKN8 822 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 PTGESO14684 152 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CILPO75339 1184 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CYP1A2P05177 515 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CKBP12277 381 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 KCNE1P15382 129 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 RRM1P23921 792 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 XKR4Q5GH76 650 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 MMS22LQ6ZRQ5 1243 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 MREGQ8N565 214 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 EIF1ADQ8N9N8 165 aaKnown RBP21.48■■□□□ 1.03
SMG8-203ENST00000578922 SLC4A11Q8NBS3 891 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 C1orf131Q8NDD1 294 aaKnown RBP21.48■■□□□ 1.03
SMG8-203ENST00000578922 DEFB118Q96PH6 123 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CYP3A43Q9HB55 503 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 CHST12Q9NRB3 414 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 LCMT1Q9UIC8 334 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 PTPN22Q9Y2R2 807 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 FRMPD3Q5JV73 1810 aa21.48■■□□□ 1.03
SMG8-203ENST00000578922 NDST1P52848 882 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 MESDQ14696 234 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 TRIM72Q6ZMU5 477 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 SLFN11Q7Z7L1 901 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 SYCE1Q8N0S2 351 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 ZNF564Q8TBZ8 553 aaPredicted RBP21.47■■□□□ 1.03
SMG8-203ENST00000578922 GAD1Q99259 594 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 KIF4AO95239 1232 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 RNASE9P60153 205 aaKnown RBP21.47■■□□□ 1.03
SMG8-203ENST00000578922 FOXR1Q6PIV2 292 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 NT5DC3Q86UY8 548 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 TMEM176AQ96HP8 235 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 MRPL45Q9BRJ2 306 aaKnown RBP21.47■■□□□ 1.03
SMG8-203ENST00000578922 FAM107BQ9H098 131 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 ADAM22Q9P0K1 906 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 RSPH14Q9UHP6 348 aa21.47■■□□□ 1.03
SMG8-203ENST00000578922 KCNK3O14649 394 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 STAU1O95793 577 aaKnown RBP21.46■■□□□ 1.03
SMG8-203ENST00000578922 DNAJC21Q5F1R6 531 aaKnown RBP21.46■■□□□ 1.03
SMG8-203ENST00000578922 DENND1BQ6P3S1 775 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 MON1BQ7L1V2 547 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 HEXIM2Q96MH2 286 aaKnown RBP21.46■■□□□ 1.03
SMG8-203ENST00000578922 TMEM51Q9NW97 253 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 PHF24Q9UPV7 400 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 ARVCFO00192 962 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 SPTLC1O15269 473 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 XPOTO43592 962 aaKnown RBP21.46■■□□□ 1.03
SMG8-203ENST00000578922 CD4P01730 458 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 IRAK1P51617 712 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 SKOR1P84550 965 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 CPNE8Q86YQ8 564 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 LRRC52Q8N7C0 313 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 FAXDC2Q96IV6 333 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 PBKQ96KB5 322 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 ADAM2Q99965 735 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 CAPS2Q9BXY5 557 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 TRIM7Q9C029 511 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 AMFRQ9UKV5 643 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 BARX2Q9UMQ3 279 aaPredicted RBP21.46■■□□□ 1.03
SMG8-203ENST00000578922 STXBP5LQ9Y2K9 1186 aa21.46■■□□□ 1.03
SMG8-203ENST00000578922 PDCD11Q14690 1871 aaKnown RBP21.45■■□□□ 1.02
SMG8-203ENST00000578922 PIRO00625 290 aa21.45■■□□□ 1.02
SMG8-203ENST00000578922 HEXIM1O94992 359 aaKnown RBP21.45■■□□□ 1.02
SMG8-203ENST00000578922 FAM26DQ5JW98 314 aa21.45■■□□□ 1.02
SMG8-203ENST00000578922 SLC43A3Q8NBI5 491 aa21.45■■□□□ 1.02
SMG8-203ENST00000578922 TSEN2Q8NCE0 465 aaKnown RBP21.45■■□□□ 1.02
SMG8-203ENST00000578922 RNF208Q9H0X6 261 aa21.45■■□□□ 1.02
SMG8-203ENST00000578922 GLI1P08151 1106 aa21.44■■□□□ 1.02
SMG8-203ENST00000578922 PAEPP09466 180 aa21.44■■□□□ 1.02
SMG8-203ENST00000578922 ATF7P17544 494 aaPredicted RBP21.44■■□□□ 1.02
SMG8-203ENST00000578922 IGFBP6P24592 240 aaPredicted RBP21.44■■□□□ 1.02
SMG8-203ENST00000578922 AGMOQ6ZNB7 445 aa21.44■■□□□ 1.02
SMG8-203ENST00000578922 C10orf67Q8IYJ2 551 aa21.44■■□□□ 1.02
SMG8-203ENST00000578922 HACE1Q8IYU2 909 aa21.44■■□□□ 1.02
SMG8-203ENST00000578922 GSTCDQ8NEC7 633 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms