RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ATICP31939 592 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SLCO1A2P46721 670 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 VPS41P49754 854 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GSCP56915 257 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 OSTNP61366 133 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ARHGAP1Q07960 439 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SLC20A2Q08357 652 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 QPCTQ16769 361 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KYAT1Q16773 422 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ATP13A4Q4VNC1 1196 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZNF394Q53GI3 561 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZFYVE27Q5T4F4 411 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 WDR78Q5VTH9 848 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 HIBCHQ6NVY1 386 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 C6orf89Q6UWU4 347 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ARMCX2Q7L311 632 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GSTA5Q7RTV2 222 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 POLNQ7Z5Q5 900 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CACNA2D3Q8IZS8 1091 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LINC01465Q8N7H1 131 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CEP120Q8N960 986 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 OPTNQ96CV9 577 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CHMP6Q96FZ7 201 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZNF668Q96K58 619 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SDCBP2Q9H190 292 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CCDC134Q9H6E4 229 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CYP3A43Q9HB55 503 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PDGFCQ9NRA1 345 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 INTS9Q9NV88 658 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ERAP1Q9NZ08 941 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 WDR35Q9P2L0 1181 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 NXF1Q9UBU9 619 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 DDX20Q9UHI6 824 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SIX4Q9UIU6 781 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 IVNS1ABPQ9Y6Y0 642 aa9.87□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SIGLEC16A6NMB1 481 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LACTBL1A8MY62 500 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 F8VP50 259 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GOLGA8SH3BPF8 625 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GPR25O00155 361 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FSBPO95073 299 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LGALS2P05162 132 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 GJB1P08034 283 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 NFICP08651 508 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KRT19P08727 400 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ABHD2P08910 425 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 STAG3L1P0CL83 205 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KRT10P13645 584 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 INSRRP14616 1297 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TCF4P15884 667 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ATF7P17544 494 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PSMA2P25787 234 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CDKN2BP42772 138 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RAP1GAPP47736 663 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LIG3P49916 1009 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RAD23BP54727 409 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 VCPP55072 806 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 STAT4Q14765 748 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CNGA2Q16280 664 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 AMHR2Q16671 573 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LONRF1Q17RB8 773 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZNF792Q3KQV3 632 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TTC31Q49AM3 519 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PTPN20Q4JDL3 420 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 TMEM63BQ5T3F8 832 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CYP4A22Q5TCH4 519 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KAZNQ674X7 775 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 USP50Q70EL3 339 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CPLX4Q7Z7G2 160 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 MICALL1Q8N3F8 863 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZCCHC9Q8N567 271 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ALLCQ8N6M5 410 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 C1orf127Q8N9H9 656 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FNIP1Q8TF40 1166 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ZC3H15Q8WU90 426 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 NKD2Q969F2 451 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 SEC16BQ96JE7 1060 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FAM118BQ9BPY3 351 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 FRMD8P1Q9BZ68 369 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PDZD7Q9H5P4 517 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 ASB7Q9H672 318 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 MINDY3Q9H8M7 445 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 VRTNQ9H8Y1 702 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 VTA1Q9NP79 307 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LGALS13Q9UHV8 139 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
CDK5RAP3-208ENST00000578525 RBM47A0AV96 593 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 LRRD1A4D1F6 860 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CILPO75339 1184 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 MICAL2O94851 1124 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 STAU1O95793 577 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 KRT7P08729 469 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 P4HA1P13674 534 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PSMC1P62191 440 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 IGBP1P78318 339 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 CCNA1P78396 465 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PPARDQ03181 441 aa9.85□□□□□ -0.83
CDK5RAP3-208ENST00000578525 PTPN11Q06124 597 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms