RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 NAA30Q147X3 362 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 PHF13Q86YI8 300 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 PASD1Q8IV76 773 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 GPR161Q8N6U8 529 aaKnown RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 SMG8Q8ND04 991 aaKnown RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ZNF564Q8TBZ8 553 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ATXN2LQ8WWM7 1075 aaKnown RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ANKRD7Q92527 254 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 NUP85Q9BW27 656 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 SDCBP2Q9H190 292 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 SMYD3Q9H7B4 428 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ERVK-5Q9HDB9 667 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ABCB6Q9NP58 842 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 FAM105AQ9NUU6 356 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 KLK14Q9P0G3 267 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 TUBGCP4Q9UGJ1 667 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 KIAA1257Q9ULG3 409 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 COG5Q9UP83 839 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 SQORQ9Y6N5 450 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 KCNK3O14649 394 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 CILPO75339 1184 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 RAB27AP51159 221 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
SREBF1-218ENST00000578469 RAB30Q15771 203 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 GLRA4Q5JXX5 417 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 FBXO47Q5MNV8 452 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 C9orf57Q5W0N0 161 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 NT5DC3Q86UY8 548 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 CREG2Q8IUH2 290 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 COG1Q8WTW3 980 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 PPM1EQ8WY54 764 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 TMEM176AQ96HP8 235 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 PSMB7Q99436 277 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 PBX4Q9BYU1 374 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 RNF39Q9H2S5 420 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 MRPL47Q9HD33 250 aaKnown RBP18■□□□□ 0.47
SREBF1-218ENST00000578469 SLC38A7Q9NVC3 462 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 ADAM22Q9P0K1 906 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 MSRAQ9UJ68 235 aa18■□□□□ 0.47
SREBF1-218ENST00000578469 BARX2Q9UMQ3 279 aaPredicted RBP18■□□□□ 0.47
SREBF1-218ENST00000578469 FAM170AA1A519 330 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 MIF4GDA9UHW6 222 aaKnown RBP17.99■□□□□ 0.47
SREBF1-218ENST00000578469 CALB1P05937 261 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 VDRP11473 427 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 COL9A1P20849 921 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 CXCR5P32302 372 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 DNA2P51530 1060 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 RAD23BP54727 409 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 ITIH3Q06033 890 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 INCA1Q0VD86 236 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 TMEM240Q5SV17 173 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 CCDC70Q6NSX1 233 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 MON1BQ7L1V2 547 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 ZNF572Q7Z3I7 529 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-218ENST00000578469 C18orf25Q96B23 403 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-218ENST00000578469 RPS6KC1Q96S38 1066 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 LHX5Q9H2C1 402 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
SREBF1-218ENST00000578469 PADI3Q9ULW8 664 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 PACSIN2Q9UNF0 486 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-218ENST00000578469 SCINQ9Y6U3 715 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 MUC3AQ02505 3323 aa17.99■□□□□ 0.47
SREBF1-218ENST00000578469 MYO9BQ13459 2157 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 TMEM110-MUSTN1A8MSY1 372 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 ARVCFO00192 962 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 PIRO00625 290 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 ATMINO43313 823 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-218ENST00000578469 GHRP10912 638 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 SKIP12755 728 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 CSF2RAP15509 400 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 CDH5P33151 784 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-218ENST00000578469 MESDQ14696 234 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 STILQ15468 1287 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 TRIM71Q2Q1W2 868 aaKnown RBP17.98■□□□□ 0.47
SREBF1-218ENST00000578469 SV2CQ496J9 727 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 UBL4BQ8N7F7 174 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 SLC4A11Q8NBS3 891 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 MSANTD4Q8NCY6 345 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 HES6Q96HZ4 224 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 C11orf70Q9BRQ4 267 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 NT5C1AQ9BXI3 368 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 ELOVL4Q9GZR5 314 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 CXCL16Q9H2A7 254 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 GOLPH3Q9H4A6 298 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 PRDM12Q9H4Q4 367 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 AGO3Q9H9G7 860 aaKnown RBP17.98■□□□□ 0.47
SREBF1-218ENST00000578469 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-218ENST00000578469 GIT1Q9Y2X7 761 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 SNX9Q9Y5X1 595 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 ALG6Q9Y672 507 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 NCOR1O75376 2440 aa17.98■□□□□ 0.47
SREBF1-218ENST00000578469 TUBBP07437 444 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 CFHP08603 1231 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 MMP8P22894 467 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 RRM1P23921 792 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 CD52P31358 61 aa17.97■□□□□ 0.47
SREBF1-218ENST00000578469 SSTR3P32745 418 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-218ENST00000578469 TAF6P49848 677 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms