RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 SNX9Q9Y5X1 595 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 GABRDO14764 452 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 PI15O43692 258 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 SOAT2O75908 522 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 FCARP24071 287 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 SOWAHAQ2M3V2 549 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 PHLDB3Q6NSJ2 640 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 TRAPPC11Q7Z392 1133 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 FSIP1Q8NA03 581 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 SHKBP1Q8TBC3 707 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 HPDLQ96IR7 371 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 ZSWIM3Q96MP5 696 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 ASB16Q96NS5 453 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 FNBP1Q96RU3 617 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 CGRRF1Q99675 332 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 PLA2G2FQ9BZM2 168 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 GPR88Q9GZN0 384 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 GOLPH3LQ9H4A5 285 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 ARHGEF3Q9NR81 526 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 DMAC2Q9NW81 257 aa24.68■■□□□ 1.54
VAPA-205ENST00000578314 RPN1P04843 607 aaKnown RBP24.67■■□□□ 1.54
VAPA-205ENST00000578314 DLATP10515 647 aaKnown RBP24.67■■□□□ 1.54
VAPA-205ENST00000578314 HAPLN1P10915 354 aaPredicted RBP24.67■■□□□ 1.54
VAPA-205ENST00000578314 TNNI1P19237 187 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 LHX1P48742 406 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 NUCB2P80303 420 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 TSPY1Q01534 308 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 MGAT5BQ3V5L5 792 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 KRBA2Q6ZNG9 492 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 ITIH5Q86UX2 942 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 SLC9A9Q8IVB4 645 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 SMARCD2Q92925 531 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 CCDC127Q96BQ5 260 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 SEPT5Q99719 369 aaPredicted RBP24.67■■□□□ 1.54
VAPA-205ENST00000578314 GZF1Q9H116 711 aaPredicted RBP24.67■■□□□ 1.54
VAPA-205ENST00000578314 KCTD10Q9H3F6 313 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 TRPV4Q9HBA0 871 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 GDPD2Q9HCC8 539 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 ZFP14Q9HCL3 533 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 TMLHEQ9NVH6 421 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 FAM86C1Q9NVL1 165 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 DDX43Q9NXZ2 648 aaKnown RBP24.67■■□□□ 1.54
VAPA-205ENST00000578314 CACNA1HO95180 2353 aa24.67■■□□□ 1.54
VAPA-205ENST00000578314 USP34Q70CQ2 3546 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 TSC2P49815 1807 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 H0Y858 1186 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 EXOC3O60645 756 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 GJA1P17302 382 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 MYL7Q01449 175 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 PFKPQ01813 784 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 TEAD2Q15562 447 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 NFE2Q16621 373 aaPredicted RBP24.66■■□□□ 1.54
VAPA-205ENST00000578314 OSTM1Q86WC4 334 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 ATOH1Q92858 354 aaPredicted RBP24.66■■□□□ 1.54
VAPA-205ENST00000578314 PKMYT1Q99640 499 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 PCDHB5Q9Y5E4 795 aa24.66■■□□□ 1.54
VAPA-205ENST00000578314 PDXKO00764 312 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 RHOBTB3O94955 611 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 ZNF202O95125 648 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 FGF19O95750 216 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 CST3P01034 146 aaPredicted RBP24.65■■□□□ 1.54
VAPA-205ENST00000578314 PRR29P0C7W0 189 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 ATF6P18850 670 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 CDR1P51861 262 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 STARD6P59095 220 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 DPYDQ12882 1025 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 INTS6LQ5JSJ4 861 aaKnown RBP24.65■■□□□ 1.54
VAPA-205ENST00000578314 GAREM2Q75VX8 874 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 ADGRF2Q8IZF7 708 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 ZNF516Q92618 1163 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 LPIN3Q9BQK8 851 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 TBC1D17Q9HA65 648 aa24.65■■□□□ 1.54
VAPA-205ENST00000578314 ZNF334Q9HCZ1 680 aaPredicted RBP24.65■■□□□ 1.54
VAPA-205ENST00000578314 A0A1W2PRU2 124 aa24.64■■□□□ 1.54
VAPA-205ENST00000578314 STK25O00506 426 aa24.64■■□□□ 1.54
VAPA-205ENST00000578314 VEPH1Q14D04 833 aa24.64■■□□□ 1.54
VAPA-205ENST00000578314 SLC44A4Q53GD3 710 aa24.64■■□□□ 1.54
VAPA-205ENST00000578314 ZSCAN18Q8TBC5 510 aaPredicted RBP24.64■■□□□ 1.54
VAPA-205ENST00000578314 SHDQ96IW2 340 aa24.64■■□□□ 1.54
VAPA-205ENST00000578314 ABCB6Q9NP58 842 aa24.64■■□□□ 1.54
VAPA-205ENST00000578314 ABI2Q9NYB9 513 aaPredicted RBP24.64■■□□□ 1.54
VAPA-205ENST00000578314 FAM163BP0C2L3 166 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 ACAT1P24752 427 aaKnown RBP24.63■■□□□ 1.53
VAPA-205ENST00000578314 PCSK1P29120 753 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 CLDN10P78369 228 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 PRKCQQ04759 706 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 FAM200AQ8TCP9 573 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 PLEKHO2Q8TD55 490 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 PARD3BQ8TEW8 1205 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 KBTBD7Q8WVZ9 684 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 CCDC47Q96A33 483 aaKnown RBP24.63■■□□□ 1.53
VAPA-205ENST00000578314 GTF3C4Q9UKN8 822 aa24.63■■□□□ 1.53
VAPA-205ENST00000578314 KIF20AO95235 890 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 STAU1O95793 577 aaKnown RBP24.62■■□□□ 1.53
VAPA-205ENST00000578314 SNW1Q13573 536 aaKnown RBP24.62■■□□□ 1.53
VAPA-205ENST00000578314 FAM171BQ6P995 826 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 CCDC105Q8IYK2 499 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 E2F7Q96AV8 911 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 PI4K2AQ9BTU6 479 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 DDX23Q9BUQ8 820 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms