RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 EPM2AIP1Q7L775 607 aaPredicted RBP15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 GPD1LQ8N335 351 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 TOP6BLQ8N6T0 577 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 C1orf127Q8N9H9 656 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 ZBTB44Q8NCP5 570 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 ZNF507Q8TCN5 953 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 FUBP3Q96I24 572 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 PGLYRP2Q96PD5 576 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 FAM213AQ9BRX8 229 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 MKNK1Q9BUB5 465 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 CHRDQ9H2X0 955 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 TASP1Q9H6P5 420 aa15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 PRMT8Q9NR22 394 aaPredicted RBP15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 ZNF638Q14966 1978 aaKnown RBP15.62■□□□□ 0.09
SMARCE1-213ENST00000578044 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 HEPACAM2A8MVW5 462 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 GABRDO14764 452 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 OR4Q2P0C623 313 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 HAPLN1P10915 354 aaPredicted RBP15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 TARSP26639 723 aaKnown RBP15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 LHX1P48742 406 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 RBP5P82980 135 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 TSPY1Q01534 308 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 UBXN2BQ14CS0 331 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 TEAD2Q15562 447 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 CFAP221Q4G0U5 840 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 ARHGAP29Q52LW3 1261 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 WSCD1Q658N2 575 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 IL21Q9HBE4 155 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 HEBP1Q9NRV9 189 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 PCDHB5Q9Y5E4 795 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 OBSL1O75147 1896 aa15.61■□□□□ 0.09
SMARCE1-213ENST00000578044 PVALEFA0A1B0GWK0 134 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 A0A1W2PRU2 124 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 NRG2O14511 850 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 HUS1O60921 280 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PAPSS2O95340 614 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 ATF6P18850 670 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PCSK1P29120 753 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 GDI1P31150 447 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 MYL7Q01449 175 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PPP2R5DQ14738 602 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 DUOXA2Q1HG44 320 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 SLC39A12Q504Y0 691 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 LRRTM3Q86VH5 581 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 RALGPS2Q86X27 583 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 ARID3BQ8IVW6 561 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 C12orf56Q8IXR9 622 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PDCL2Q8N4E4 241 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 TRMT2BQ96GJ1 504 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 MYRFLQ96LU7 910 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PKMYT1Q99640 499 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 CBWD1Q9BRT8 395 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 INTS13Q9NVM9 706 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 CFAP45Q9UL16 551 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 SLC27A5Q9Y2P5 690 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 MTF2Q9Y483 593 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 GREB1Q4ZG55 1949 aa15.6■□□□□ 0.09
SMARCE1-213ENST00000578044 PTPRDP23468 1912 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 LILRB5O75023 590 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ITGB3P05106 788 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 CSH1P0DML2 217 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 CSH2P0DML3 217 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ZSCAN22P10073 491 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 PFKLP17858 780 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 GABRR2P28476 465 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 POLR2BP30876 1174 aaKnown RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 NRLP54845 237 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 RPL10AP62906 217 aaKnown RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 TFAMQ00059 246 aaKnown RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 MYO1EQ12965 1108 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ZNF268Q14587 947 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 BMT2Q1RMZ1 405 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 SHC4Q6S5L8 630 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 WDR49Q8IV35 697 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ADSSL1Q8N142 457 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 TMEM130Q8N3G9 435 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 SYNPOQ8N3V7 929 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 PDILTQ8N807 584 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 KIAA1958Q8N8K9 716 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ANKRD36BP1Q96IX9 119 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 GCNAQ96QF7 691 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 TMEM209Q96SK2 561 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 SLITRK6Q9H5Y7 841 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 KIF9Q9HAQ2 790 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 SPATA6Q9NWH7 488 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ZSCAN32Q9NX65 697 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 TBC1D7Q9P0N9 293 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 UXTQ9UBK9 157 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 AGAP1Q9UPQ3 857 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 PIAS3Q9Y6X2 628 aa15.59■□□□□ 0.09
SMARCE1-213ENST00000578044 ANAPC1Q9H1A4 1944 aa15.58■□□□□ 0.09
SMARCE1-213ENST00000578044 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.08
SMARCE1-213ENST00000578044 KINO60870 393 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-213ENST00000578044 STAU1O95793 577 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-213ENST00000578044 MYL1P05976 194 aa15.58■□□□□ 0.08
SMARCE1-213ENST00000578044 HMGA1P17096 107 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-213ENST00000578044 HOXA6P31267 233 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms