RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 SLC10A2Q12908 348 aaPredicted RBP3.47□□□□□ -1.85
CDH8-204ENST00000577536 NOGQ13253 232 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 LLGL1Q15334 1064 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 EZH2Q15910 746 aaKnown RBP3.47□□□□□ -1.85
CDH8-204ENST00000577536 PLAC9Q5JTB6 97 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 RBM20Q5T481 1227 aaKnown RBP3.47□□□□□ -1.85
CDH8-204ENST00000577536 THEMIS2Q5TEJ8 643 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 SUMO4Q6EEV6 95 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 MIER2Q8N344 545 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 FAM109AQ8N4B1 249 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 PRPF38AQ8NAV1 312 aaKnown RBP3.47□□□□□ -1.85
CDH8-204ENST00000577536 SEMA6DQ8NFY4 1073 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 ZNF778Q96MU6 729 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 TINAGL1Q9GZM7 467 aaPredicted RBP3.47□□□□□ -1.85
CDH8-204ENST00000577536 WDCPQ9H6R7 721 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 SERTAD4Q9NUC0 356 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 FLRT1Q9NZU1 646 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 DKK3Q9UBP4 350 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 ZNF70Q9UC06 446 aaPredicted RBP3.47□□□□□ -1.85
CDH8-204ENST00000577536 SBNO2Q9Y2G9 1366 aa3.47□□□□□ -1.85
CDH8-204ENST00000577536 WDR91A4D1P6 747 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 TARM1B6A8C7 271 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 SLC16A6O15403 523 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 HNRNPCP07910 306 aaKnown RBP eCLIP3.46□□□□□ -1.86
CDH8-204ENST00000577536 CCND1P24385 295 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 PCSK6P29122 969 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 TOB1P50616 345 aaPredicted RBP3.46□□□□□ -1.86
CDH8-204ENST00000577536 TFF2Q03403 129 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 BMPR2Q13873 1038 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 TBCCQ15814 346 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 SRSF7Q16629 238 aaKnown RBP eCLIP3.46□□□□□ -1.86
CDH8-204ENST00000577536 ZNF551Q7Z340 670 aaPredicted RBP3.46□□□□□ -1.86
CDH8-204ENST00000577536 HEATR3Q7Z4Q2 680 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 PPP1R32Q7Z5V6 425 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 USP37Q86T82 979 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 FAM136AQ96C01 138 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 MRPL46Q9H2W6 279 aaKnown RBP3.46□□□□□ -1.86
CDH8-204ENST00000577536 ABCF2Q9UG63 623 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 SERGEFQ9UGK8 458 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 ZDHHC8Q9ULC8 765 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 RAD54BQ9Y620 910 aa3.46□□□□□ -1.86
CDH8-204ENST00000577536 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 DTNBO60941 627 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 NXPH3O95157 252 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 GNAI2P04899 355 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 NDUFB7P17568 137 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 PDCP20941 246 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 GCLCP48506 637 aaPredicted RBP3.45□□□□□ -1.86
CDH8-204ENST00000577536 HK3P52790 923 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 EVA1CP58658 441 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 GRM1Q13255 1194 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 TMEM119Q4V9L6 283 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 TEDDM1Q5T9Z0 273 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 VPS53Q5VIR6 699 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 ZNF782Q6ZMW2 699 aaPredicted RBP3.45□□□□□ -1.86
CDH8-204ENST00000577536 PRR18Q8N4B5 295 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 VGLL2Q8N8G2 317 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 KLHDC4Q8TBB5 520 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 ATRIPQ8WXE1 791 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 DDX17Q92841 729 aaKnown RBP3.45□□□□□ -1.86
CDH8-204ENST00000577536 TNPO1Q92973 898 aaKnown RBP3.45□□□□□ -1.86
CDH8-204ENST00000577536 RGMAQ96B86 450 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 SERHLQ9NQF3 203 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 ARHGEF3Q9NR81 526 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 FEZ2Q9UHY8 353 aaPredicted RBP3.45□□□□□ -1.86
CDH8-204ENST00000577536 SPEF1Q9Y4P9 236 aa3.45□□□□□ -1.86
CDH8-204ENST00000577536 WASHC2CQ9Y4E1 1318 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 M0QYG6 137 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 LATS1O95835 1130 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 FTLP02792 175 aaPredicted RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 PDHA1P08559 390 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 FAM163BP0C2L3 166 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 JUPP14923 745 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 RECQLP46063 649 aaPredicted RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 SSBP2P81877 361 aaPredicted RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 EIF2B5Q13144 721 aaKnown RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 BOP1Q14137 746 aaKnown RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 ZNF618Q5T7W0 954 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 FAM160B1Q5W0V3 765 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 ZNF425Q6IV72 752 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 CEP85Q6P2H3 762 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 USP45Q70EL2 814 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 DTX2Q86UW9 622 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 PPP1R3BQ86XI6 285 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 CPA6Q8N4T0 437 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 TBC1D5Q92609 795 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 NELL2Q99435 816 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 SMAD5Q99717 465 aaKnown RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 ASPSCR1Q9BZE9 553 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 SEMA4CQ9C0C4 833 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.44□□□□□ -1.86
CDH8-204ENST00000577536 ZNF804BA4D1E1 1349 aa3.44□□□□□ -1.86
CDH8-204ENST00000577536 CADPSQ9ULU8 1353 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 PPM1DO15297 605 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 JTBO76095 146 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 SNUPNO95149 360 aaKnown RBP3.43□□□□□ -1.86
CDH8-204ENST00000577536 AHSGP02765 367 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 PRR35P0CG20 571 aa3.43□□□□□ -1.86
CDH8-204ENST00000577536 PIM1P11309 404 aaPredicted RBP3.43□□□□□ -1.86
CDH8-204ENST00000577536 TYRP14679 529 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms