RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 SIT1Q9Y3P8 196 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 KIF20AO95235 890 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 PCSK1P29120 753 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
SF3B3-215ENST00000577085 LHX1P48742 406 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 PRKCQQ04759 706 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 EHHADHQ08426 723 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 MLF2Q15773 248 aaPredicted RBP16.66■□□□□ 0.26
SF3B3-215ENST00000577085 BMT2Q1RMZ1 405 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 SLC44A4Q53GD3 710 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 YAF2Q8IY57 180 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 OR5B17Q8NGF7 314 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 FAM84AQ96KN4 292 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 MMS19Q96T76 1030 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 LPIN3Q9BQK8 851 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 ACBD6Q9BR61 282 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 TRMT61BQ9BVS5 477 aaKnown RBP16.66■□□□□ 0.26
SF3B3-215ENST00000577085 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 ATXN3LQ9H3M9 355 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 BRD9Q9H8M2 597 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 TCHHQ07283 1943 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 ZNF318Q5VUA4 2279 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 TSC2P49815 1807 aa16.66■□□□□ 0.26
SF3B3-215ENST00000577085 PHACTR2O75167 634 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 ACAT1P24752 427 aaKnown RBP16.65■□□□□ 0.26
SF3B3-215ENST00000577085 GABRR2P28476 465 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 MRE11P49959 708 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 CYP24A1Q07973 514 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 TRPC3Q13507 836 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 GRM2Q14416 872 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 PSMD6Q15008 389 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 KMT5BQ4FZB7 885 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 CCDC105Q8IYK2 499 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 DTWD2Q8NBA8 298 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 SHKBP1Q8TBC3 707 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 SPATA18Q8TC71 538 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 GIPC2Q8TF65 315 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 E2F7Q96AV8 911 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 ZSWIM3Q96MP5 696 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 FAM86C1Q9NVL1 165 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 SIX4Q9UIU6 781 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 HPSEQ9Y251 543 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 SCN1AP35498 2009 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
SF3B3-215ENST00000577085 GOLGA6L4A6NEF3 574 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 DPYSL4O14531 572 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 RPN1P04843 607 aaKnown RBP16.64■□□□□ 0.25
SF3B3-215ENST00000577085 HAPLN1P10915 354 aaPredicted RBP16.64■□□□□ 0.25
SF3B3-215ENST00000577085 PSMC3P17980 439 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 CDC25CP30307 473 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 NDUFA8P51970 172 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 STARD6P59095 220 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 TNNC1P63316 161 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 STK4Q13043 487 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 INTS6LQ5JSJ4 861 aaKnown RBP16.64■□□□□ 0.25
SF3B3-215ENST00000577085 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 LRRTM3Q86VH5 581 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 TMC8Q8IU68 726 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 SPATA2LQ8IUW3 424 aaPredicted RBP16.64■□□□□ 0.25
SF3B3-215ENST00000577085 C12orf56Q8IXR9 622 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 DEPDC1BQ8WUY9 529 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 IRF7Q92985 503 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 PI4K2AQ9BTU6 479 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 PLA2G2FQ9BZM2 168 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 PTPRJQ12913 1337 aa16.64■□□□□ 0.25
SF3B3-215ENST00000577085 NOTCH4Q99466 2003 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 KANSL1LA0AUZ9 987 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 ZNF263O14978 683 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 MOSPD3O75425 235 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 DCNP07585 359 aaKnown RBP16.63■□□□□ 0.25
SF3B3-215ENST00000577085 ATF6P18850 670 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 FCARP24071 287 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 GDI1P31150 447 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 VIPR2P41587 438 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
SF3B3-215ENST00000577085 SOWAHAQ2M3V2 549 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 GPR158Q5T848 1215 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 TPRG1Q6ZUI0 275 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 PJA1Q8NG27 643 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 CXorf38Q8TB03 319 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 FOXQ1Q9C009 403 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 SNX25Q9H3E2 840 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 ZNF334Q9HCZ1 680 aaPredicted RBP16.63■□□□□ 0.25
SF3B3-215ENST00000577085 GTF3C4Q9UKN8 822 aa16.63■□□□□ 0.25
SF3B3-215ENST00000577085 MAGED2Q9UNF1 606 aaPredicted RBP16.63■□□□□ 0.25
SF3B3-215ENST00000577085 MRPS17Q9Y2R5 130 aaKnown RBP16.63■□□□□ 0.25
SF3B3-215ENST00000577085 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms