RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 OXCT2Q9BYC2 517 aaPredicted RBP12.8□□□□□ -0.36
LITAF-219ENST00000576334 LRRC27Q9C0I9 530 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 SLITRK6Q9H5Y7 841 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 ZFP14Q9HCL3 533 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 DSEQ9UL01 958 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 CFAP45Q9UL16 551 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 SIT1Q9Y3P8 196 aa12.8□□□□□ -0.36
LITAF-219ENST00000576334 ZNF233A6NK53 670 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
LITAF-219ENST00000576334 CST3P01034 146 aaPredicted RBP12.79□□□□□ -0.36
LITAF-219ENST00000576334 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 DLATP10515 647 aaKnown RBP12.79□□□□□ -0.36
LITAF-219ENST00000576334 LMO2P25791 158 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 GABRR2P28476 465 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 STK4Q13043 487 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 PLD1Q13393 1074 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 UBXN2BQ14CS0 331 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 SNRNP35Q16560 246 aaKnown RBP12.79□□□□□ -0.36
LITAF-219ENST00000576334 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 KIAA0895Q8NCT3 520 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 PLEKHO2Q8TD55 490 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 CACTINQ8WUQ7 758 aaKnown RBP12.79□□□□□ -0.36
LITAF-219ENST00000576334 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 PSMG2Q969U7 264 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 CCDC127Q96BQ5 260 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 SPATA32Q96LK8 384 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 PKMYT1Q99640 499 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 SMG9Q9H0W8 520 aaKnown RBP12.79□□□□□ -0.36
LITAF-219ENST00000576334 IL21Q9HBE4 155 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
LITAF-219ENST00000576334 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
LITAF-219ENST00000576334 CACNA1IQ9P0X4 2223 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 KANSL1LA0AUZ9 987 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 MYBPHLA2RUH7 354 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 FAM170BA6NMN3 283 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 MICAL2O94851 1124 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 HAPLN1P10915 354 aaPredicted RBP12.78□□□□□ -0.36
LITAF-219ENST00000576334 CMA1P23946 247 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 CYP2F1P24903 491 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 GDI1P31150 447 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 NDUFA8P51970 172 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 PSMC1P62191 440 aaKnown RBP12.78□□□□□ -0.36
LITAF-219ENST00000576334 RBP5P82980 135 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 CYP24A1Q07973 514 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 DDR2Q16832 855 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 KMT5BQ4FZB7 885 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 ASCL5Q7RTU5 278 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 ARID3BQ8IVW6 561 aaPredicted RBP12.78□□□□□ -0.36
LITAF-219ENST00000576334 CEP57L1Q8IYX8 460 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 ANKRD36BP1Q96IX9 119 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 DDX23Q9BUQ8 820 aaKnown RBP12.78□□□□□ -0.36
LITAF-219ENST00000576334 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 GOLPH3LQ9H4A5 285 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 MAGEF1Q9HAY2 307 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 HPSEQ9Y251 543 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 OBSL1O75147 1896 aa12.78□□□□□ -0.36
LITAF-219ENST00000576334 KIF26AQ9ULI4 1882 aaPredicted RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 PVALEFA0A1B0GWK0 134 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 HUS1O60921 280 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 PRPF40AO75400 957 aaKnown RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 TNNI1P19237 187 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 PAX3P23760 479 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 PNPLA4P41247 253 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 SOX9P48436 509 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 NUBP1P53384 320 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 DUOXA2Q1HG44 320 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 INTS6LQ5JSJ4 861 aaKnown RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 GPR158Q5T848 1215 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 TRAPPC11Q7Z392 1133 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 WDR49Q8IV35 697 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 MAML2Q8IZL2 1156 aaPredicted RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
LITAF-219ENST00000576334 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.37
LITAF-219ENST00000576334 SLC46A2Q9BY10 475 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms