RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 OR6B3Q8NGW1 331 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 OR10T2Q8NGX3 314 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 PPM1EQ8WY54 764 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 KREMEN1Q96MU8 473 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 ARID3AQ99856 593 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 LSM14BQ9BX40 385 aaKnown RBP9.16□□□□□ -0.94
NUP88-211ENST00000575976 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 SNX25Q9H3E2 840 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 NSUN3Q9H649 340 aaKnown RBP9.16□□□□□ -0.94
NUP88-211ENST00000575976 CYP3A43Q9HB55 503 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
NUP88-211ENST00000575976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.16□□□□□ -0.94
NUP88-211ENST00000575976 IFNKQ9P0W0 207 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 SIK3Q9Y2K2 1263 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 CDY1Q9Y6F8 540 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 NCOR1O75376 2440 aa9.16□□□□□ -0.94
NUP88-211ENST00000575976 OR6C75A6NL08 312 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 A8MXQ7 604 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 AP5Z1O43299 807 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 CLASP2O75122 1294 aaKnown RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 ATP2C2O75185 946 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 CD58P19256 250 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 TBXAS1P24557 533 aaPredicted RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 KLRC2P26717 231 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 OR1D2P34982 312 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 GTF2F1P35269 517 aaKnown RBP eCLIP9.15□□□□□ -0.94
NUP88-211ENST00000575976 GNL1P36915 607 aaPredicted RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 NRIP1P48552 1158 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 NDST1P52848 882 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 PLCB2Q00722 1185 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 CREMQ03060 361 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 HYAL1Q12794 435 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 RAB33AQ14088 237 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 DUSP6Q16828 381 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 AAK1Q2M2I8 961 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 SLC8B1Q6J4K2 584 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 LRRTM3Q86VH5 581 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 UBR7Q8N806 425 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 WHAMMQ8TF30 809 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 ERGIC2Q96RQ1 377 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 TWNKQ96RR1 684 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 ACBD6Q9BR61 282 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 OXCT2Q9BYC2 517 aaPredicted RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 DPEP3Q9H4B8 488 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 TLE6Q9H808 572 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 CISHQ9NSE2 258 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 APEX2Q9UBZ4 518 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 HMGXB4Q9UGU5 601 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 DNAJC12Q9UKB3 198 aa9.15□□□□□ -0.94
NUP88-211ENST00000575976 AJAP1Q9UKB5 411 aaPredicted RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 BARX2Q9UMQ3 279 aaPredicted RBP9.15□□□□□ -0.94
NUP88-211ENST00000575976 WDR27A2RRH5 827 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 MYBPHLA2RUH7 354 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 EPHB6O15197 1021 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 CILPO75339 1184 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 NOL4O94818 638 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 ADH1AP07327 375 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 CPB1P15086 417 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 ACO1P21399 889 aaKnown RBP9.14□□□□□ -0.95
NUP88-211ENST00000575976 PCSK1P29120 753 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 NDUFV1P49821 464 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 CDR1P51861 262 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
NUP88-211ENST00000575976 ROR1Q01973 937 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 GCNT1Q02742 428 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 INCA1Q0VD86 236 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 ORC1Q13415 861 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 ARHGAP44Q17R89 818 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 CCDC142Q17RM4 750 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
NUP88-211ENST00000575976 KLHDC7AQ5VTJ3 777 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 IQCEQ6IPM2 695 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 LILRA6Q6PI73 481 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 RNF19BQ6ZMZ0 732 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 UNC93AQ86WB7 457 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 MICALL1Q8N3F8 863 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 SLC22A17Q8WUG5 538 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 PKMYT1Q99640 499 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 LPIN3Q9BQK8 851 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 SYT15Q9BQS2 421 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 XPO4Q9C0E2 1151 aaKnown RBP9.14□□□□□ -0.95
NUP88-211ENST00000575976 ELOVL4Q9GZR5 314 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 GANQ9H2C0 597 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 IGFLR1Q9H665 355 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 PLCB1Q9NQ66 1216 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 FAM207AQ9NSI2 230 aaPredicted RBP9.14□□□□□ -0.95
NUP88-211ENST00000575976 TMLHEQ9NVH6 421 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 GTF3C4Q9UKN8 822 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 CDH9Q9ULB4 789 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 PCDHB4Q9Y5E5 795 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
NUP88-211ENST00000575976 TSC2P49815 1807 aa9.13□□□□□ -0.95
NUP88-211ENST00000575976 A0A1W2PQC6 194 aa9.13□□□□□ -0.95
NUP88-211ENST00000575976 RNF225M0QZC1 329 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms