RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 GOLGA8SH3BPF8 625 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 SMIM10L2AP0DMW4 78 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 SMIM10L2BP0DMW5 78 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 TCF4P15884 667 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 CETN2P41208 172 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 GRM5P41594 1212 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 OGDHQ02218 1023 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 IFFO1Q0D2I5 559 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 MAP2K5Q13163 448 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 PIGHQ14442 188 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-208ENST00000574755 ODF2Q5BJF6 829 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 CST9Q5W186 159 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 RUFY4Q6ZNE9 571 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 TLK2Q86UE8 772 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 GRK7Q8WTQ7 553 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 GCOM2Q9BZD3 368 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-208ENST00000574755 ELOVL4Q9GZR5 314 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 SYNCQ9H7C4 482 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 HOMER3Q9NSC5 361 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 ASIC3Q9UHC3 531 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 CYTH4Q9UIA0 394 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 R3HDM2Q9Y2K5 976 aaKnown RBP14.86□□□□□ -0.03
VPS33B-208ENST00000574755 SHOX2O60902 331 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 NPTXRO95502 500 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 GAS8O95995 478 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 F2P00734 622 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 RBP5P82980 135 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 DCAF4L1Q3SXM0 396 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 ATP13A4Q4VNC1 1196 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 MORN1Q5T089 497 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 CATSPER4Q7RTX7 472 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 NT5DC4Q86YG4 428 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 LENG1Q96BZ8 264 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 GNEQ9Y223 722 aaKnown RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 PI4K2BG5E9Z4 385 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 KRT1P04264 644 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 KRT3P12035 628 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 NR1D1P20393 614 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 ATP1A2P50993 1020 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 NFX1Q12986 1120 aaKnown RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 DPH6Q7L8W6 267 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 ART4Q93070 314 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 CPXM1Q96SM3 734 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 OSMRQ99650 979 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 FAM118BQ9BPY3 351 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 ADAMTS10Q9H324 1103 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 PABPC3Q9H361 631 aaKnown RBP14.85□□□□□ -0.03
VPS33B-208ENST00000574755 FLRT1Q9NZU1 646 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 CENPFP49454 3210 aa14.85□□□□□ -0.03
VPS33B-208ENST00000574755 IGF2BP3O00425 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 GPR32O75388 356 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 CYP2C9P11712 490 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 ATF7P17544 494 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 PSMC1P62191 440 aaKnown RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 SKOR1P84550 965 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 CDC42EP1Q00587 391 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 TAF1CQ15572 869 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 KAZNQ674X7 775 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 OLFML2BQ68BL8 750 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 SLC27A1Q6PCB7 646 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 SYDE1Q6ZW31 735 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 APBB1IPQ7Z5R6 666 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 ANKS1BQ7Z6G8 1248 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 RCOR2Q8IZ40 523 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 ATL2Q8NHH9 583 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 HEXIM2Q96MH2 286 aaKnown RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 BCCIPQ9P287 314 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 M0QYV0 167 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 MICAL2O94851 1124 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 HOXA11P31270 313 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 RFC1P35251 1148 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 ZNF157P51786 506 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 HNRNPH2P55795 449 aaKnown RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 EIF3BP55884 814 aaKnown RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 GNGT1P63211 74 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 IRX5P78411 483 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 TRIP13Q15645 432 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 CCNG2Q16589 344 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 KRT71Q3SY84 523 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 LRRC38Q5VT99 294 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 DENND2CQ68D51 928 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 TTC19Q6DKK2 380 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 KDM7AQ6ZMT4 941 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 NIPA2Q8N8Q9 360 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 KAT2BQ92831 832 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 SLITRK1Q96PX8 696 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 FAM129AQ9BZQ8 928 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 CDHR5Q9HBB8 845 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 SNTG2Q9NY99 539 aa14.84□□□□□ -0.03
VPS33B-208ENST00000574755 BARX2Q9UMQ3 279 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS33B-208ENST00000574755 SIGLEC16A6NMB1 481 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 KRT10P13645 584 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 PSMA2P25787 234 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 IRAK1P51617 712 aa14.83□□□□□ -0.03
VPS33B-208ENST00000574755 NDST1P52848 882 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms