RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GABRDO14764 452 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 CFHP08603 1231 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 ACAT1P24752 427 aaKnown RBP25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 BMS1Q14692 1282 aaKnown RBP25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 SLC30A5Q8TAD4 765 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 ZNF606Q8WXB4 792 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 EIF3CQ99613 913 aaKnown RBP25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 DDX43Q9NXZ2 648 aaKnown RBP25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 REXO2Q9Y3B8 237 aaKnown RBP25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 TRAPPC3O43617 180 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 CYP11A1P05108 521 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 ANXA13P27216 316 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 RASIP1Q5U651 963 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 C12orf29Q8N999 325 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 PCDHB18PQ96TA0 734 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 LPIN3Q9BQK8 851 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 GPR62Q9BZJ7 368 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 DSEQ9UL01 958 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 ADGRG1Q9Y653 693 aa25.59■■□□□ 1.69
ATPAF1-213ENST00000574428 FAM163BP0C2L3 166 aa25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 TKTP29401 623 aaKnown RBP25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 KCNT2Q6UVM3 1135 aa25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 METTL23Q86XA0 190 aa25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 ZNF677Q86XU0 584 aa25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 PHOSPHO2Q8TCD6 241 aa25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 INSL6Q9Y581 213 aa25.58■■□□□ 1.69
ATPAF1-213ENST00000574428 SF3B1O75533 1304 aaKnown RBP eCLIP25.57■■□□□ 1.684e-6■■■■■ 120.3
ATPAF1-213ENST00000574428 LCA5LO95447 670 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 LHX1P48742 406 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 PSMC1P62191 440 aaKnown RBP25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 SPA17Q15506 151 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 FAM171A1Q5VUB5 890 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 FUT10Q6P4F1 479 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 PASD1Q8IV76 773 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 ZNF558Q96NG5 402 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 NAGPAQ9UK23 515 aa25.57■■□□□ 1.68
ATPAF1-213ENST00000574428 ARHGEF37A1IGU5 675 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 ATP2C2O75185 946 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 IPO7O95373 1038 aaKnown RBP25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 LAG3P18627 525 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 TYMPP19971 482 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 OVOS1Q6IE37 1185 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 DNAAF5Q86Y56 855 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 COLGALT1Q8NBJ5 622 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 B3GALT6Q96L58 329 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 RAD9AQ99638 391 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 RTP3Q9BQQ7 232 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 PDCL3Q9H2J4 239 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 FAM49BQ9NUQ9 324 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 PPP2R2CQ9Y2T4 447 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 KIAA1671Q9BY89 1806 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 TMCO5BA8MYB1 307 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 TLL1O43897 1013 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 CCDC175P0C221 793 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 VDRP11473 427 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 SHHQ15465 462 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 CCDC142Q17RM4 750 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 SGO2Q562F6 1265 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 KIAA0319Q5VV43 1072 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 CRYBG2Q8N1P7 616 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 FIBCD1Q8N539 461 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 IGSF21Q96ID5 467 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 RNPC3Q96LT9 517 aaKnown RBP25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 TAS2R14Q9NYV8 317 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 NENFQ9UMX5 172 aa25.56■■□□□ 1.68
ATPAF1-213ENST00000574428 CCDC122Q5T0U0 273 aa25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 ALKBH5Q6P6C2 394 aaKnown RBP25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 CEP57Q86XR8 500 aa25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 B3GALNT2Q8NCR0 500 aa25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 TNIP3Q96KP6 325 aa25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 TRMT1Q9NXH9 659 aaKnown RBP25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 KIAA1257Q9ULG3 409 aa25.55■■□□□ 1.68
ATPAF1-213ENST00000574428 A0A0U1RQJ8 604 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 LCHNA4D1U4 455 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 MED7O43513 233 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 YWHAHQ04917 246 aaPredicted RBP25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 SLC39A11Q8N1S5 342 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 SPATA18Q8TC71 538 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 ATRIPQ8WXE1 791 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 SYT15Q9BQS2 421 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 TFR2Q9UP52 801 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 USP27XA6NNY8 438 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 O00370 1275 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 SYN3O14994 580 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 CDR1P51861 262 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 RABGGTBP53611 331 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 KRT83P78385 493 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 TAS1R1Q7RTX1 841 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 VN1R3Q9BXE9 311 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 PCDHA13Q9Y5I0 950 aa25.54■■□□□ 1.68
ATPAF1-213ENST00000574428 VWA8A3KMH1 1905 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 LINC00271P0C7V0 271 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 CCDC130P13994 396 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 PTPN1P18031 435 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 FGFR3P22607 806 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 PCSK1P29120 753 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 ELAVL2Q12926 359 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 CLEC16AQ2KHT3 1053 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 VARS2Q5ST30 1063 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms