RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 CCDC105Q8IYK2 499 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 PDCL2Q8N4E4 241 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 DEPDC1BQ8WUY9 529 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 DNASE1L2Q92874 299 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 TMEM209Q96SK2 561 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 NELL2Q99435 816 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 LRRC3Q9BY71 257 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 OSBPL6Q9BZF3 934 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 DNAJC25Q9H1X3 360 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 CRISPLD1Q9H336 500 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 SIX4Q9UIU6 781 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 SNX9Q9Y5X1 595 aa17.73■□□□□ 0.43
TVP23B-207ENST00000574294 FAM163BP0C2L3 166 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 TNNI1P19237 187 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 CDC25CP30307 473 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 AP3M2P53677 418 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 MLF2Q15773 248 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-207ENST00000574294 TAF12Q16514 161 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 SLC44A4Q53GD3 710 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 ARHGAP15Q53QZ3 475 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 TMC8Q8IU68 726 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 NELFCDQ8IXH7 590 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 HS6ST3Q8IZP7 471 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 FAM200AQ8TCP9 573 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-207ENST00000574294 IRF7Q92985 503 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 HPDLQ96IR7 371 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 GCNAQ96QF7 691 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 SEPT5Q99719 369 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-207ENST00000574294 TRMT61BQ9BVS5 477 aaKnown RBP17.72■□□□□ 0.43
TVP23B-207ENST00000574294 SLITRK6Q9H5Y7 841 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 L1RE1Q9UN81 338 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 SIT1Q9Y3P8 196 aa17.72■□□□□ 0.43
TVP23B-207ENST00000574294 SOBPA7XYQ1 873 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 KLRC4O43908 158 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 EXOC3O60645 756 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 MOSPD3O75425 235 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 HAPLN1P10915 354 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 PSMC3P17980 439 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 CASP1P29466 404 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 WEE1P30291 646 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 MAGEA9P43362 315 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 CYP2J2P51589 502 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 RPL10AP62906 217 aaKnown RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 CYP24A1Q07973 514 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 MAPRE1Q15691 268 aaKnown RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 TANGO2Q6ICL3 276 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 TRAPPC11Q7Z392 1133 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 SLC9A9Q8IVB4 645 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 ADGRF2Q8IZF7 708 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 DTWD2Q8NBA8 298 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 SHKBP1Q8TBC3 707 aa17.71■□□□□ 0.43
TVP23B-207ENST00000574294 ZSCAN18Q8TBC5 510 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 FUBP3Q96I24 572 aaKnown RBP eCLIP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 DDX23Q9BUQ8 820 aaKnown RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 DDX43Q9NXZ2 648 aaKnown RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 ABI2Q9NYB9 513 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 MRPS17Q9Y2R5 130 aaKnown RBP17.71■□□□□ 0.43
TVP23B-207ENST00000574294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.7■□□□□ 0.42
TVP23B-207ENST00000574294 KANSL1LA0AUZ9 987 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 PDXKO00764 312 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 GABRDO14764 452 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 CLIC2O15247 247 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 NCAM2O15394 837 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 PI15O43692 258 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
TVP23B-207ENST00000574294 FCARP24071 287 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 MRE11P49959 708 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 NUCB2P80303 420 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 TEAD2Q15562 447 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 INTS6LQ5JSJ4 861 aaKnown RBP17.7■□□□□ 0.42
TVP23B-207ENST00000574294 LIMS2Q7Z4I7 341 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 LRRTM3Q86VH5 581 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 MFSD6LQ8IWD5 586 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 RDH13Q8NBN7 331 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 PJA1Q8NG27 643 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 OR5B17Q8NGF7 314 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 CEP295NLQ96MC4 621 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 BRD9Q9H8M2 597 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 OBP2AQ9NY56 170 aa17.7■□□□□ 0.42
TVP23B-207ENST00000574294 MIA3Q5JRA6 1907 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 A0A1W2PRU2 124 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 MAN2B1O00754 1011 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 STAU1O95793 577 aaKnown RBP17.69■□□□□ 0.42
TVP23B-207ENST00000574294 RPN1P04843 607 aaKnown RBP17.69■□□□□ 0.42
TVP23B-207ENST00000574294 CSH1P0DML2 217 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 CSH2P0DML3 217 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 GLULP15104 373 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 GABRR2P28476 465 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 ATICP31939 592 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 MLLT6P55198 1093 aaPredicted RBP17.69■□□□□ 0.42
TVP23B-207ENST00000574294 STK4Q13043 487 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 SNW1Q13573 536 aaKnown RBP17.69■□□□□ 0.42
TVP23B-207ENST00000574294 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 CFAP221Q4G0U5 840 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 C1orf228Q6PIY5 440 aa17.69■□□□□ 0.42
TVP23B-207ENST00000574294 C4orf50Q6ZRC1 276 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms