RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 HOMER3Q9NSC5 361 aa7.97□□□□□ -1.13
RPA1-207ENST00000574049 KLHL14Q9P2G3 628 aa7.97□□□□□ -1.13
RPA1-207ENST00000574049 ALG6Q9Y672 507 aa7.97□□□□□ -1.13
RPA1-207ENST00000574049 NFASCO94856 1347 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 CCDC195A0A1B0GUA6 201 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 HMGB1P1B2RPK0 211 aaPredicted RBP7.96□□□□□ -1.13
RPA1-207ENST00000574049 DIAPH2O60879 1101 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 UPP2O95045 317 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 SGPL1O95470 568 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 HOXD10P28358 340 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 ALDH3A1P30838 453 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 POLR2BP30876 1174 aaKnown RBP7.96□□□□□ -1.13
RPA1-207ENST00000574049 MAPK7Q13164 816 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 DUSP28Q4G0W2 176 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 CYP4A22Q5TCH4 519 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 KLHDC7AQ5VTJ3 777 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 C1orf228Q6PIY5 440 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 C4orf33Q8N1A6 199 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 CEP120Q8N960 986 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 DNAAF3Q8N9W5 541 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 AGPAT1Q99943 283 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 SHCBP1LQ9BZQ2 653 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 OLFML3Q9NRN5 406 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 MORF4L1Q9UBU8 362 aa7.96□□□□□ -1.13
RPA1-207ENST00000574049 M0QZ92 97 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 NDC80O14777 642 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 PFDN1O60925 122 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ALDH1A1P00352 501 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 COMTP21964 271 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 PON1P27169 355 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ICAM3P32942 547 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ARHGAP1Q07960 439 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 GRB14Q14449 540 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 FSCN1Q16658 493 aaKnown RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 IQSEC1Q6DN90 963 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 TWF2Q6IBS0 349 aaKnown RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 TAPT1Q6NXT6 567 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 LRRC55Q6ZSA7 311 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ZNF571Q7Z3V5 609 aaPredicted RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 NLRP14Q86W24 1093 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 RNF10Q8N5U6 811 aaKnown RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 TMEM161BQ8NDZ6 487 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 CFAP61Q8NHU2 1237 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ZNF507Q8TCN5 953 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 DTX3LQ8TDB6 740 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 SH3TC2Q8TF17 1288 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 RMDN2Q96LZ7 410 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 FGD4Q96M96 766 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 RNF186Q9NXI6 227 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 APEX2Q9UBZ4 518 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 MARCOQ9UEW3 520 aaPredicted RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 NAGPAQ9UK23 515 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 DNAJC25-GNG10A0A024R161 153 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 APLP1P51693 650 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 PSMC1P62191 440 aaKnown RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 PDE1BQ01064 536 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 CAPSQ13938 189 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 KYNUQ16719 465 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 C17orf99Q6UX52 265 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 UBA3Q8TBC4 463 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 TAS1R2Q8TE23 839 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 PRMT1Q99873 361 aaKnown RBP7.96□□□□□ -1.14
RPA1-207ENST00000574049 KCTD10Q9H3F6 313 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 SLC40A1Q9NP59 571 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 XPNPEP3Q9NQH7 507 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 KCND2Q9NZV8 630 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 CEP350Q5VT06 3117 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ARFGEF1Q9Y6D6 1849 aa7.96□□□□□ -1.14
RPA1-207ENST00000574049 ADGRA3Q8IWK6 1321 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 STK10O94804 968 aaKnown RBP7.95□□□□□ -1.14
RPA1-207ENST00000574049 KRT10P13645 584 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 HOXD13P35453 343 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 GPS1Q13098 491 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 PAN2Q504Q3 1202 aaKnown RBP7.95□□□□□ -1.14
RPA1-207ENST00000574049 IER5Q5VY09 327 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 ARMC3Q5W041 872 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 NXNQ6DKJ4 435 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 PRUNE1Q86TP1 453 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 TTC17Q96AE7 1141 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 HVCN1Q96D96 273 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 PBKQ96KB5 322 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 GBP5Q96PP8 586 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 APBA2Q99767 749 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 SH3GL3Q99963 347 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 SIK2Q9H0K1 926 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 KLK14Q9P0G3 267 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 HES2Q9Y543 173 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 MAFBQ9Y5Q3 323 aaPredicted RBP7.95□□□□□ -1.14
RPA1-207ENST00000574049 IGSF9BQ9UPX0 1349 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 BRCA1P38398 1863 aaKnown RBP7.95□□□□□ -1.14
RPA1-207ENST00000574049 DYTNA2CJ06 578 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 AKR1A1P14550 325 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 EDNRBP24530 442 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 LSP1P33241 339 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 MSH2P43246 934 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 BPIFB4P59827 614 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 LRRC23Q53EV4 343 aaPredicted RBP7.95□□□□□ -1.14
RPA1-207ENST00000574049 ZBTB41Q5SVQ8 909 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 FAXCQ5TGI0 409 aa7.95□□□□□ -1.14
RPA1-207ENST00000574049 CCDC62Q6P9F0 684 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms