RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 SP140Q13342 867 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ARHGEF7Q14155 803 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 MEA1Q16626 185 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 PLEKHN1Q494U1 663 aaPredicted RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 PRAMEF14Q5SWL7 426 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ADGRF1Q5T601 910 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 SLC9C2Q5TAH2 1124 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 MAP3K21Q5TCX8 1036 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 FAXCQ5TGI0 409 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 AFMIDQ63HM1 303 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 PLAG1Q6DJT9 500 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 SLC23A3Q6PIS1 610 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ZDHHC24Q6UX98 284 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 BBS12Q6ZW61 710 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 RRAGAQ7L523 313 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ENOSF1Q7L5Y1 443 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ZNF572Q7Z3I7 529 aaPredicted RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 SPRED2Q7Z698 418 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 CLEC14AQ86T13 490 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 USP37Q86T82 979 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 SLC51AQ86UW1 340 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 CHD1LQ86WJ1 897 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 PDSS2Q86YH6 399 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 CCDC28AQ8IWP9 274 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 NRSN1Q8IZ57 195 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 LILRA3Q8N6C8 439 aaPredicted RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 AOPEPQ8N6M6 819 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 PLA2G15Q8NCC3 412 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ZMIZ2Q8NF64 920 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 NLGN4YQ8NFZ3 816 aaPredicted RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 CEP70Q8NHQ1 597 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 MDM1Q8TC05 714 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ADAMTS15Q8TE58 950 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 SMCR8Q8TEV9 937 aaPredicted RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 CPA5Q8WXQ8 436 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 RAPGEF4Q8WZA2 1011 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 RSC1A1Q92681 617 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 GOLGA1Q92805 767 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 DDX17Q92841 729 aaKnown RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 CLIC6Q96NY7 704 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 TWNKQ96RR1 684 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 PPP1R9BQ96SB3 815 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 NELL2Q99435 816 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 MYOCQ99972 504 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 AGXT2Q9BYV1 514 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 TWSG1Q9GZX9 223 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 BRD8Q9H0E9 1235 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 PDCL3Q9H2J4 239 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 TP63Q9H3D4 680 aaPredicted RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 EPS8L2Q9H6S3 715 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 CHODLQ9H9P2 273 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 NOD2Q9HC29 1040 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 XPNPEP3Q9NQH7 507 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 SH3GLB2Q9NR46 395 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 KRT84Q9NSB2 600 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 RLIMQ9NVW2 624 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 HAUS2Q9NVX0 235 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 JKAMPQ9P055 326 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 KLHL14Q9P2G3 628 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 XPR1Q9UBH6 696 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 LPAR3Q9UBY5 353 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 CA14Q9ULX7 337 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 CAPN11Q9UMQ6 739 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 TBC1D30Q9Y2I9 924 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 VWA7Q9Y334 891 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 RRP7AQ9Y3A4 280 aaKnown RBP2.37□□□□□ -2.03
CHD3-217ENST00000574022 DTNAQ9Y4J8 743 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 RUSC2Q8N2Y8 1516 aa2.37□□□□□ -2.03
CHD3-217ENST00000574022 ATRNL1Q5VV63 1379 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TDRD9Q8NDG6 1382 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 FAM170AA1A519 330 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 PABPN1LA6NDY0 278 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 ZNF785A8K8V0 405 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 E7EVH7 732 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 H0Y3Z8 333 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 H7C4K7 107 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 WNT10BO00744 389 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ABLIM1O14639 778 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TOR1BO14657 336 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 MTSS1O43312 755 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ANP32CO43423 234 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 AHCYL1O43865 530 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TMEM63AO94886 807 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CHGBP05060 677 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 C8BP07358 591 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 SLC3A2P08195 630 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 HNRNPA1P09651 372 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD3-217ENST00000574022 RAP2AP10114 183 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CYP2C8P10632 490 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CYP2C9P11712 490 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 XRCC6P12956 609 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD3-217ENST00000574022 ALOX12P18054 663 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ATP5JP18859 108 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CHMP24386 653 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 GALNSP34059 522 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 STAT1P42224 750 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 MEOX1P50221 254 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 PTH1RQ03431 593 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD3-217ENST00000574022 NSUN2Q08J23 767 aaKnown RBP eCLIP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 479.4 ms