RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	IER5L	Q5T953	404 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	DPH6	Q7L8W6	267 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	TRAPPC11	Q7Z392	1133 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	ADGRF2	Q8IZF7	708 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	TOP6BL	Q8N6T0	577 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	KIAA0895	Q8NCT3	520 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	SPATA18	Q8TC71	538 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	PSMG2	Q969U7	264 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	ELSPBP1	Q96BH3	223 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	TCEAL4	Q96EI5	215 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	RTP3	Q9BQQ7	232 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	ACBD6	Q9BR61	282 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	RPP25	Q9BUL9	199 aa	Known RBP	12.83	□□□□□ -0.36
ABR-222	ENST00000573667	IRF2BPL	Q9H1B7	796 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	ZFP14	Q9HCL3	533 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	SIX4	Q9UIU6	781 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	L1RE1	Q9UN81	338 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	PCDHB5	Q9Y5E4	795 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	ANAPC1	Q9H1A4	1944 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667		A0A1W2PRU2	124 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	CALU	O43852	315 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-222	ENST00000573667	PHACTR2	O75167	634 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	SOAT2	O75908	522 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	GJA1	P17302	382 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	AOC1	P19801	751 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	PCSK1	P29120	753 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	CCR2	P41597	374 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	EPHA5	P54756	1037 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	TRPC3	Q13507	836 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	ARHGAP15	Q53QZ3	475 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	CWF19L1	Q69YN2	538 aa	Known RBP	12.82	□□□□□ -0.36
ABR-222	ENST00000573667	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-222	ENST00000573667	TTC9B	Q8N6N2	239 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	TMEM105	Q8N8V8	129 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	CXorf38	Q8TB03	319 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	SHD	Q96IW2	340 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	FAM84A	Q96KN4	292 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	GCNA	Q96QF7	691 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	MMS19	Q96T76	1030 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	DNAJC25	Q9H1X3	360 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	ARHGEF3	Q9NR81	526 aa		12.82	□□□□□ -0.36
ABR-222	ENST00000573667	HELZ	P42694	1942 aa	Known RBP	12.82	□□□□□ -0.36
ABR-222	ENST00000573667	KRBA1	A5PL33	1030 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	PDXK	O00764	312 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	RHOBTB3	O94955	611 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	PRR29	P0C7W0	189 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	HAPLN1	P10915	354 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-222	ENST00000573667	ACAT1	P24752	427 aa	Known RBP	12.81	□□□□□ -0.36
ABR-222	ENST00000573667	GABRR2	P28476	465 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	CDR1	P51861	262 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	AP3M2	P53677	418 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	TNNC1	P63316	161 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	NHLH1	Q02575	133 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	DPYD	Q12882	1025 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	TEAD2	Q15562	447 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	SOWAHA	Q2M3V2	549 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	INTS6L	Q5JSJ4	861 aa	Known RBP	12.81	□□□□□ -0.36
ABR-222	ENST00000573667	FAM78A	Q5JUQ0	283 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	TANGO2	Q6ICL3	276 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	LRRTM3	Q86VH5	581 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	SLC9A9	Q8IVB4	645 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	PRSS33	Q8NF86	280 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-222	ENST00000573667	SMARCD2	Q92925	531 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	ASB16	Q96NS5	453 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	LPIN3	Q9BQK8	851 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	PI4K2A	Q9BTU6	479 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	ATXN3L	Q9H3M9	355 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	GOLPH3L	Q9H4A5	285 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	FRMD4B	Q9Y2L6	1034 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	PATJ	Q8NI35	1801 aa		12.81	□□□□□ -0.36
ABR-222	ENST00000573667	COL4A2	P08572	1712 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	GABRD	O14764	452 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	GALR2	O43603	387 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	MOSPD3	O75425	235 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	CST3	P01034	146 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	NR3C1	P04150	777 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	NPR3	P17342	541 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	ATF6	P18850	670 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	CDC25C	P30307	473 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	RPL10A	P62906	217 aa	Known RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	PRKCQ	Q04759	706 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	BIRC3	Q13489	604 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	KCNB1	Q14721	858 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	MAPRE1	Q15691	268 aa	Known RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	WDR72	Q3MJ13	1102 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	CEP135	Q66GS9	1140 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	SCARA3	Q6AZY7	606 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	PHLDB3	Q6NSJ2	640 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	C4orf50	Q6ZRC1	276 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	TMC8	Q8IU68	726 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	SHKBP1	Q8TBC3	707 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	GIPC2	Q8TF65	315 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	DEPDC1B	Q8WUY9	529 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	SYAP1	Q96A49	352 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	E2F7	Q96AV8	911 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	TRMT61B	Q9BVS5	477 aa	Known RBP	12.8	□□□□□ -0.36
ABR-222	ENST00000573667	LRRC3	Q9BY71	257 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	SNX25	Q9H3E2	840 aa		12.8	□□□□□ -0.36

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