RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RAP1GAPP47736 663 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 PTPN5P54829 565 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 ITIH3Q06033 890 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 ADCY1Q08828 1119 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 SMAD2Q15796 467 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 PUS10Q3MIT2 529 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 CBWD6Q4V339 395 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 SLC39A12Q504Y0 691 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 CBWD3Q5JTY5 395 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 CBWD5Q5RIA9 395 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 SPOPLQ6IQ16 392 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 CES5AQ6NT32 575 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 FILIP1Q7Z7B0 1213 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 THEM5Q8N1Q8 247 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 TMEM86AQ8N2M4 240 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 HDAC7Q8WUI4 952 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 SUSD6Q92537 303 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 MRPL45Q9BRJ2 306 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 OXCT2Q9BYC2 517 aaPredicted RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 ADAM7Q9H2U9 754 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 CYP4F11Q9HBI6 524 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 DDX43Q9NXZ2 648 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 DACH1Q9UI36 760 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 RIF1Q5UIP0 2472 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 EPG5Q9HCE0 2579 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 CCDC195A0A1B0GUA6 201 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 PRRG1O14668 218 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 STX10O60499 249 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 LRRN2O75325 713 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 ASS1P00966 412 aaKnown RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 ATF2P15336 505 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 GTF2H1P32780 548 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 MCCD1P59942 119 aaPredicted RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 CBX2Q14781 532 aaPredicted RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 ZNF667Q5HYK9 610 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 PPM1LQ5SGD2 360 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 TPGS2Q68CL5 300 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 KRT39Q6A163 491 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 LIMS2Q7Z4I7 341 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 FRMD5Q7Z6J6 570 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 ADHFE1Q8IWW8 467 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 TTC9BQ8N6N2 239 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 CMASQ8NFW8 434 aaPredicted RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 ZNF707Q96C28 371 aaPredicted RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 ZCWPW1Q9H0M4 648 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 CRISPLD1Q9H336 500 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 POMKQ9H5K3 350 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 VRTNQ9H8Y1 702 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 AFF4Q9UHB7 1163 aaKnown RBP16.93■□□□□ 0.3
CHD3-215ENST00000572750 FAM50BQ9Y247 325 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 NME7Q9Y5B8 376 aa16.93■□□□□ 0.3
CHD3-215ENST00000572750 ZNF292O60281 2723 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 FRYLO94915 3013 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 MTMR11A4FU01 709 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 GABRDO14764 452 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 CCL16O15467 120 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 SP100P23497 879 aaPredicted RBP16.92■□□□□ 0.3
CHD3-215ENST00000572750 ELF1P32519 619 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 PSMC1P62191 440 aaKnown RBP16.92■□□□□ 0.3
CHD3-215ENST00000572750 NOP14P78316 857 aaKnown RBP16.92■□□□□ 0.3
CHD3-215ENST00000572750 MYL7Q01449 175 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 TSPY1Q01534 308 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 GPR17Q13304 367 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 SGSM1Q2NKQ1 1148 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 GPR149Q86SP6 731 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 LRRTM3Q86VH5 581 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 SMG7Q92540 1137 aaKnown RBP16.92■□□□□ 0.3
CHD3-215ENST00000572750 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 CNOT6LQ96LI5 555 aaKnown RBP16.92■□□□□ 0.3
CHD3-215ENST00000572750 IMPG2Q9BZV3 1241 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 INSL5Q9Y5Q6 135 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 PTPRDP23468 1912 aa16.92■□□□□ 0.3
CHD3-215ENST00000572750 DOCK6Q96HP0 2047 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 FGFR1OPO95684 399 aaKnown RBP16.91■□□□□ 0.3
CHD3-215ENST00000572750 GNA14O95837 355 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
CHD3-215ENST00000572750 LMO2P25791 158 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 ASPAP45381 313 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 STX1AQ16623 288 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 TPD52L1Q16890 204 aaPredicted RBP16.91■□□□□ 0.3
CHD3-215ENST00000572750 INTS6LQ5JSJ4 861 aaKnown RBP16.91■□□□□ 0.3
CHD3-215ENST00000572750 CCDC149Q6ZUS6 474 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 C11orf57Q6ZUT1 292 aaPredicted RBP16.91■□□□□ 0.3
CHD3-215ENST00000572750 DPH6Q7L8W6 267 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 TRIM59Q8IWR1 403 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 ATAD1Q8NBU5 361 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 FBXL13Q8NEE6 735 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 SPATA18Q8TC71 538 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 RIPOR3Q96MK2 946 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 PRKD2Q9BZL6 878 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 SDCBP2Q9H190 292 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 PIDD1Q9HB75 910 aa16.91■□□□□ 0.3
CHD3-215ENST00000572750 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
CHD3-215ENST00000572750 TMLHEQ9NVH6 421 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms