RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 TMEM134Q9H6X4 195 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 OTOL1A6NHN0 477 aaPredicted RBP11.03□□□□□ -0.64
CHMP6-203ENST00000572525 PATE3B3GLJ2 98 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 CDKL5O76039 1030 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 CYP3A5P20815 502 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 RPA1P27694 616 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 GJA4P35212 333 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 GALK1P51570 392 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 SIM1P81133 766 aaPredicted RBP11.03□□□□□ -0.64
CHMP6-203ENST00000572525 SMARCB1Q12824 385 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 VEPH1Q14D04 833 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 UAP1L1Q3KQV9 507 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 ZNF568Q3ZCX4 644 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 TRIM61Q5EBN2 209 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 LMBRD2Q68DH5 695 aaPredicted RBP11.03□□□□□ -0.64
CHMP6-203ENST00000572525 KIAA1211LQ6NV74 962 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 RABEPKQ7Z6M1 372 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 CATSPER3Q86XQ3 398 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 CPA6Q8N4T0 437 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 C2orf15Q8WU43 125 aaKnown RBP11.03□□□□□ -0.64
CHMP6-203ENST00000572525 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 TSPAN18Q96SJ8 248 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 SLC46A2Q9BY10 475 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 MRPL4Q9BYD3 311 aaKnown RBP11.03□□□□□ -0.64
CHMP6-203ENST00000572525 PLEKHA5Q9HAU0 1116 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 MYH10P35580 1976 aa11.03□□□□□ -0.64
CHMP6-203ENST00000572525 ARHGEF35A5YM69 484 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 ABLIM1O14639 778 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 NEMFO60524 1076 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 ENGP17813 658 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 AVPR1AP37288 418 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 P2RY2P41231 377 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 SCAPQ12770 1279 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
CHMP6-203ENST00000572525 GSE1Q14687 1217 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 COL28A1Q2UY09 1125 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 HSF5Q4G112 596 aaPredicted RBP11.02□□□□□ -0.65
CHMP6-203ENST00000572525 CC2D1AQ6P1N0 951 aaPredicted RBP11.02□□□□□ -0.65
CHMP6-203ENST00000572525 MPZL3Q6UWV2 235 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 USP37Q86T82 979 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 CEP76Q8TAP6 659 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 ADAMTS14Q8WXS8 1223 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 EZH1Q92800 747 aaPredicted RBP11.02□□□□□ -0.65
CHMP6-203ENST00000572525 CD101Q93033 1021 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 TNFRSF25Q93038 417 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 C18orf25Q96B23 403 aaPredicted RBP11.02□□□□□ -0.65
CHMP6-203ENST00000572525 EBF3Q9H4W6 596 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 FBRSL1Q9HCM7 1045 aaKnown RBP11.02□□□□□ -0.65
CHMP6-203ENST00000572525 TDP1Q9NUW8 608 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 ARHGAP28Q9P2N2 729 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 MMP17Q9ULZ9 603 aa11.02□□□□□ -0.65
CHMP6-203ENST00000572525 ATMQ13315 3056 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 KNL1Q8NG31 2342 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 SPAARA0A1B0GVQ0 90 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 TK2O00142 265 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 EPB41L2O43491 1005 aaKnown RBP11.01□□□□□ -0.65
CHMP6-203ENST00000572525 LARGE1O95461 756 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 TCF3P15923 654 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 LIG1P18858 919 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 BCKDHBP21953 392 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 DHPSP49366 369 aaPredicted RBP11.01□□□□□ -0.65
CHMP6-203ENST00000572525 CYP4F8P98187 520 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 BFSP1Q12934 665 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 SLC14A1Q13336 389 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 BYSLQ13895 437 aaKnown RBP11.01□□□□□ -0.65
CHMP6-203ENST00000572525 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 EARS2Q5JPH6 523 aaKnown RBP11.01□□□□□ -0.65
CHMP6-203ENST00000572525 RUFY3Q7L099 469 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 HDDC3Q8N4P3 179 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 KIAA1958Q8N8K9 716 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 ATAD1Q8NBU5 361 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 PIGKQ92643 395 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
CHMP6-203ENST00000572525 ATP2A3Q93084 1043 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 SPACA7Q96KW9 195 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 PGLYRP2Q96PD5 576 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 CCDC86Q9H6F5 360 aaKnown RBP11.01□□□□□ -0.65
CHMP6-203ENST00000572525 TMEM206Q9H813 350 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 ECT2Q9H8V3 914 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 C17orf75Q9HAS0 396 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 BRMS1Q9HCU9 246 aa11.01□□□□□ -0.65
CHMP6-203ENST00000572525 EIF4E1BA6NMX2 242 aaKnown RBP11□□□□□ -0.65
CHMP6-203ENST00000572525 XPOTO43592 962 aaKnown RBP11□□□□□ -0.65
CHMP6-203ENST00000572525 CDC45O75419 566 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 MED24O75448 989 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 ALDH1A2O94788 518 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 CYP11A1P05108 521 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 OR4Q2P0C623 313 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 ATF6P18850 670 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 TXKP42681 527 aa11□□□□□ -0.65
CHMP6-203ENST00000572525 NR1H3Q13133 447 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms