RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 CDR1P51861 262 aa21.61■■□□□ 1.05
NUP88-204ENST00000572290 NFE2Q16621 373 aaPredicted RBP21.61■■□□□ 1.05
NUP88-204ENST00000572290 NFIL3Q16649 462 aa21.61■■□□□ 1.05
NUP88-204ENST00000572290 INTS6LQ5JSJ4 861 aaKnown RBP21.61■■□□□ 1.05
NUP88-204ENST00000572290 LIMS2Q7Z4I7 341 aa21.61■■□□□ 1.05
NUP88-204ENST00000572290 TMLHEQ9NVH6 421 aa21.61■■□□□ 1.05
NUP88-204ENST00000572290 ABI2Q9NYB9 513 aaPredicted RBP21.61■■□□□ 1.05
NUP88-204ENST00000572290 HOOK1Q9UJC3 728 aaKnown RBP21.61■■□□□ 1.05
NUP88-204ENST00000572290 PCDHB5Q9Y5E4 795 aa21.61■■□□□ 1.05
NUP88-204ENST00000572290 SMC2O95347 1197 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 PDGFBP01127 241 aaPredicted RBP21.6■■□□□ 1.05
NUP88-204ENST00000572290 HAPLN1P10915 354 aaPredicted RBP21.6■■□□□ 1.05
NUP88-204ENST00000572290 SRFP11831 508 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 NR2F2P24468 414 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 PCSK1P29120 753 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 CLDN10P78369 228 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 BIRC3Q13489 604 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 ITIH5Q86UX2 942 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 FAM200AQ8TCP9 573 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 GSDMAQ96QA5 445 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 MMS19Q96T76 1030 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 RPP25Q9BUL9 199 aaKnown RBP21.6■■□□□ 1.05
NUP88-204ENST00000572290 FBXL21Q9UKT6 434 aa21.6■■□□□ 1.05
NUP88-204ENST00000572290 MOSPD3O75425 235 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 STAU1O95793 577 aaKnown RBP21.59■■□□□ 1.05
NUP88-204ENST00000572290 CFHP08603 1231 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 RPL13P26373 211 aaKnown RBP21.59■■□□□ 1.05
NUP88-204ENST00000572290 ATICP31939 592 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 MYL6P60660 151 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 VEPH1Q14D04 833 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 POTEHQ6S545 545 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 DNAJB7Q7Z6W7 309 aaPredicted RBP21.59■■□□□ 1.05
NUP88-204ENST00000572290 TMC8Q8IU68 726 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 SMYD4Q8IYR2 804 aaPredicted RBP21.59■■□□□ 1.05
NUP88-204ENST00000572290 TMC2Q8TDI7 906 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 KBTBD7Q8WVZ9 684 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 SMARCE1Q969G3 411 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 PSMG2Q969U7 264 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 SYAP1Q96A49 352 aaPredicted RBP21.59■■□□□ 1.05
NUP88-204ENST00000572290 LRRC3Q9BY71 257 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 CHMP5Q9NZZ3 219 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 PCDHA5Q9Y5H7 936 aa21.59■■□□□ 1.05
NUP88-204ENST00000572290 MAPK13O15264 365 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 HCRTO43612 131 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 C4BPAP04003 597 aaKnown RBP21.58■■□□□ 1.05
NUP88-204ENST00000572290 GJA1P17302 382 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 ATF6P18850 670 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 WARSP23381 471 aaKnown RBP21.58■■□□□ 1.05
NUP88-204ENST00000572290 TNNC1P63316 161 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 DLG4P78352 724 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 WDR72Q3MJ13 1102 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 TDRD10Q5VZ19 366 aaKnown RBP21.58■■□□□ 1.05
NUP88-204ENST00000572290 SPATA20Q8TB22 786 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 SHKBP1Q8TBC3 707 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 PKMYT1Q99640 499 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 LPIN3Q9BQK8 851 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 PI4K2AQ9BTU6 479 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 MFSD1Q9H3U5 465 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 WNT16Q9UBV4 365 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 GTF3C4Q9UKN8 822 aa21.58■■□□□ 1.05
NUP88-204ENST00000572290 NRG2O14511 850 aaPredicted RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 KINO60870 393 aaKnown RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 GADD45BO75293 160 aaPredicted RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 ECI2O75521 394 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 AKAP3O75969 853 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 FAM163BP0C2L3 166 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 ANP32AP39687 249 aaKnown RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 ADAM9Q13443 819 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 TEAD2Q15562 447 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 ZCWPW2Q504Y3 356 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 ZNF658Q5TYW1 1059 aaPredicted RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 ELOA2Q8IYF1 753 aaPredicted RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 GIPC2Q8TF65 315 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 ERCC4Q92889 916 aaPredicted RBP21.57■■□□□ 1.04
NUP88-204ENST00000572290 KXD1Q9BQD3 176 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 SYT15Q9BQS2 421 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 XYLT2Q9H1B5 865 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 SLC2A4RGQ9NR83 387 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 CDH9Q9ULB4 789 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 TECTAO75443 2155 aa21.57■■□□□ 1.04
NUP88-204ENST00000572290 SCN1AP35498 2009 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 A0A1W2PRU2 124 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 MYBPHLA2RUH7 354 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 TACC1O75410 805 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 FGF19O95750 216 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 LMO2P25791 158 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 GPC5P78333 572 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 NCOA4Q13772 614 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 TAF12Q16514 161 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 EDRF1Q3B7T1 1238 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 COBLL1Q53SF7 1204 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 INTS8Q75QN2 995 aaKnown RBP21.56■■□□□ 1.04
NUP88-204ENST00000572290 SPATA2LQ8IUW3 424 aaPredicted RBP21.56■■□□□ 1.04
NUP88-204ENST00000572290 FAM186BQ8IYM0 893 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 SIX5Q8N196 739 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 GPR152Q8TDT2 470 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 MRPL45Q9BRJ2 306 aaKnown RBP21.56■■□□□ 1.04
NUP88-204ENST00000572290 GTPBP4Q9BZE4 634 aaKnown RBP21.56■■□□□ 1.04
NUP88-204ENST00000572290 GPR88Q9GZN0 384 aa21.56■■□□□ 1.04
NUP88-204ENST00000572290 SNX25Q9H3E2 840 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms