RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 GTF3C4Q9UKN8 822 aa9.32□□□□□ -0.92
TRAPPC1-203ENST00000571739 COQ4Q9Y3A0 265 aa9.32□□□□□ -0.92
TRAPPC1-203ENST00000571739 R3HCC1Q9Y3T6 440 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-203ENST00000571739 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 N4BP1O75113 896 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 SOAT2O75908 522 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 HNRNPA1P09651 372 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 ERCC5P28715 1186 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 HOXA9P31269 272 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 ELF1P32519 619 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 GNL1P36915 607 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 MTHFRP42898 656 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 RAP1GAPP47736 663 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 LHX1P48742 406 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 SLC39A12Q504Y0 691 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 TCERG1LQ5VWI1 586 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 CYP26C1Q6V0L0 522 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 CCDC149Q6ZUS6 474 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 GRASPQ7Z6J2 395 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 GJD3Q8N144 294 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 OR6B3Q8NGW1 331 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 TAF4BQ92750 862 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 TATDN2Q93075 761 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 RPGRIP1Q96KN7 1286 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 RIPOR3Q96MK2 946 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 UHRF1Q96T88 793 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 SMYD3Q9H7B4 428 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 WDR6Q9NNW5 1121 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 CRTAC1Q9NQ79 661 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 HCFC1R1Q9NWW0 138 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 MAFFQ9ULX9 164 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 FAM50BQ9Y247 325 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 INSL5Q9Y5Q6 135 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 NOTCH4Q99466 2003 aa9.31□□□□□ -0.92
TRAPPC1-203ENST00000571739 XIRP2A4UGR9 3374 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 C2orf16Q68DN1 1984 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 PRRG1O14668 218 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 PMM2O15305 246 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 GNA14O95837 355 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 HAPLN1P10915 354 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 PTPN2P17706 415 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 SP100P23497 879 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 ASPAP45381 313 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 FMO5P49326 533 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 TNNC1P63316 161 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 MYL7Q01449 175 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 TWF1Q12792 350 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 SMARCB1Q12824 385 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 ZNF699Q32M78 642 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 CCDC40Q4G0X9 1142 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 DCAF17Q5H9S7 520 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 CCDC183Q5T5S1 534 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 LIN9Q5TKA1 542 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 ELMSAN1Q6PJG2 1045 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 DCP1BQ8IZD4 617 aaKnown RBP9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 HS6ST3Q8IZP7 471 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 FBXL13Q8NEE6 735 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 LMO3Q8TAP4 145 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 WHAMMQ8TF30 809 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 NECTIN4Q96NY8 510 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 LRRC3Q9BY71 257 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 BCO2Q9BYV7 579 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 DPEP3Q9H4B8 488 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 PIDD1Q9HB75 910 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 HSFX1Q9UBD0 423 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 CDH9Q9ULB4 789 aa9.3□□□□□ -0.92
TRAPPC1-203ENST00000571739 TSC2P49815 1807 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 A8MXQ7 604 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 C2CD4DB7Z1M9 353 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 DLL1O00548 723 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 STX10O60499 249 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 MOSPD3O75425 235 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 LRG1P02750 347 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 POU2F2P09086 479 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 PTPN1P18031 435 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 ATF6P18850 670 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 CYP2F1P24903 491 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 PCSK1P29120 753 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 CCR2P41597 374 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 PIK3CAP42336 1068 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 TUFMP49411 452 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 GPR15P49685 360 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 MXI1P50539 228 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 PSMC1P62191 440 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 C11orf57Q6ZUT1 292 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 PAQR9Q6ZVX9 377 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 DNAJB7Q7Z6W7 309 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 CRYBG2Q8N1P7 616 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 SPPL2BQ8TCT7 592 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms