RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 MLF2Q15773 248 aaPredicted RBP32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 SLC44A4Q53GD3 710 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 ITIH5Q86UX2 942 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 WDR49Q8IV35 697 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 TMEM86AQ8N2M4 240 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 XXYLT1Q8NBI6 393 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 FAM200AQ8TCP9 573 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 SMARCD2Q92925 531 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 LPIN3Q9BQK8 851 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 ZNF334Q9HCZ1 680 aaPredicted RBP32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 EXOC1Q9NV70 894 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 USP25Q9UHP3 1055 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 ATF6P18850 670 aa32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 MYO1EQ12965 1108 aa32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 KNOP1Q1ED39 458 aaKnown RBP32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 DTWD2Q8NBA8 298 aa32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 ZSCAN18Q8TBC5 510 aaPredicted RBP32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 GPR88Q9GZN0 384 aa32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 DDX43Q9NXZ2 648 aaKnown RBP32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 CGNQ9P2M7 1197 aaKnown RBP32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 COL4A3Q01955 1670 aa32.61■■■□□ 2.81
CTDNEP1-206ENST00000571409 DLATP10515 647 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-206ENST00000571409 GRM2Q14416 872 aa32.6■■■□□ 2.81
CTDNEP1-206ENST00000571409 VEPH1Q14D04 833 aa32.6■■■□□ 2.81
CTDNEP1-206ENST00000571409 FOXQ1Q9C009 403 aa32.6■■■□□ 2.81
CTDNEP1-206ENST00000571409 TMLHEQ9NVH6 421 aa32.6■■■□□ 2.81
CTDNEP1-206ENST00000571409 SIT1Q9Y3P8 196 aa32.6■■■□□ 2.81
CTDNEP1-206ENST00000571409 HAPLN1P10915 354 aaPredicted RBP32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 MYL7Q01449 175 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 PRKCQQ04759 706 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 CYP24A1Q07973 514 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 PSMD6Q15008 389 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 KMT5BQ4FZB7 885 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 GAREM2Q75VX8 874 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 ADGRF2Q8IZF7 708 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 TOP6BLQ8N6T0 577 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 HPDLQ96IR7 371 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 FNBP1Q96RU3 617 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 ACBD6Q9BR61 282 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 SCAND2PQ9GZW5 306 aaPredicted RBP32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 PCDHB5Q9Y5E4 795 aa32.59■■■□□ 2.81
CTDNEP1-206ENST00000571409 FGF19O95750 216 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 DCNP07585 359 aaKnown RBP32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 TNNI1P19237 187 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 ACAT1P24752 427 aaKnown RBP32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 SYKP43405 635 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 STK4Q13043 487 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 SOWAHAQ2M3V2 549 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 STXBP5Q5T5C0 1151 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 VITQ6UXI7 678 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 TRAPPC11Q7Z392 1133 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 OSTM1Q86WC4 334 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 C12orf56Q8IXR9 622 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 KIAA0895Q8NCT3 520 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 PJA1Q8NG27 643 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 SPATA18Q8TC71 538 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 GIPC2Q8TF65 315 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 CCDC127Q96BQ5 260 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 CGRRF1Q99675 332 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 ATXN3LQ9H3M9 355 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 TRPV4Q9HBA0 871 aa32.58■■■□□ 2.81
CTDNEP1-206ENST00000571409 GABRR2P28476 465 aa32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 VIPR2P41587 438 aa32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 NDUFA8P51970 172 aa32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 PSMD2Q13200 908 aa32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 NFE2Q16621 373 aaPredicted RBP32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 INTS6LQ5JSJ4 861 aaKnown RBP32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 DDX23Q9BUQ8 820 aaKnown RBP32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 TRMT61BQ9BVS5 477 aaKnown RBP32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 BRD9Q9H8M2 597 aa32.57■■■□□ 2.8
CTDNEP1-206ENST00000571409 KANSL1LA0AUZ9 987 aa32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 PRPF40AO75400 957 aaKnown RBP32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 MYL1P05976 194 aa32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 PSMC3P17980 439 aa32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 LHX1P48742 406 aa32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 TAF12Q16514 161 aa32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 PI4K2AQ9BTU6 479 aa32.56■■■□□ 2.8
CTDNEP1-206ENST00000571409 FAM237AA0A1B0GTK4 181 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 GABRDO14764 452 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 EXOC3O60645 756 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 ANGPT1Q15389 498 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 DPH6Q7L8W6 267 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 GOLGA5Q8TBA6 731 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 DEPDC1BQ8WUY9 529 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 DNASE1L2Q92874 299 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 HEBP1Q9NRV9 189 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 DLGAP2Q9P1A6 1054 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 GTF3C4Q9UKN8 822 aa32.55■■■□□ 2.8
CTDNEP1-206ENST00000571409 NCANO14594 1321 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 HCRTO43612 131 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 PCSK1P29120 753 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 BECN1Q14457 450 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 ARHGAP15Q53QZ3 475 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 TPRG1Q6ZUI0 275 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 FSIP1Q8NA03 581 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 PKMYT1Q99640 499 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 MKNK1Q9BUB5 465 aa32.54■■■□□ 2.8
CTDNEP1-206ENST00000571409 A0A1W2PQ27 194 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 A0A1W2PQ64 194 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 A0A1W2PQD8 194 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms