RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCARF1-205ENST00000571272 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-205ENST00000571272 PCK1P35558 622 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 VCPP55072 806 aaKnown RBP18.4■□□□□ 0.54
SCARF1-205ENST00000571272 OGDHQ02218 1023 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
SCARF1-205ENST00000571272 DCUN1D2Q6PH85 259 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 LARGE2Q8N3Y3 721 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF606Q8WXB4 792 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 OSBPL1AQ9BXW6 950 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 HAPLN2Q9GZV7 340 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 CLUHO75153 1309 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 TMEM191CA6NGB0 347 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 TMEM191BP0C7N4 346 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 HARSP12081 509 aaKnown RBP18.39■□□□□ 0.53
SCARF1-205ENST00000571272 RASSF2P50749 326 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 SLC18A1P54219 525 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 OASLQ15646 514 aaKnown RBP18.39■□□□□ 0.53
SCARF1-205ENST00000571272 HIF1AQ16665 826 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 MSS51Q4VC12 460 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 ANKRD22Q5VYY1 191 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 RFWD2Q8NHY2 731 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 ANKFY1Q9P2R3 1169 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 MYH9P35579 1960 aaKnown RBP18.39■□□□□ 0.53
SCARF1-205ENST00000571272 PDHA1P08559 390 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 GLRA2P23416 452 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
SCARF1-205ENST00000571272 SESN3P58005 492 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 MTERF2Q49AM1 385 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 OR5B17Q8NGF7 314 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 PYROXD1Q8WU10 500 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 C17orf75Q9HAS0 396 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-205ENST00000571272 ARHGAP28Q9P2N2 729 aa18.39■□□□□ 0.53
SCARF1-205ENST00000571272 hCG_1818297A0A087WSY0 165 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 A0A0G2JND7 137 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 ASNSP08243 561 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CCDC142Q17RM4 750 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 FNBP1LQ5T0N5 605 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 FYB2Q5VWT5 728 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 RFWD3Q6PCD5 774 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 TCP10LQ8TDR4 215 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 TMEM143Q96AN5 459 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CYLDQ9NQC7 956 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 SLC24A2Q9UI40 661 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 RABGEF1Q9UJ41 708 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 LRRC42Q9Y546 428 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 DGAT1O75907 488 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 STBD1O95210 358 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 LUC7L3O95232 432 aaKnown RBP18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CHRM1P11229 460 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-205ENST00000571272 MMP8P22894 467 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 PTDSS1P48651 473 aaKnown RBP18.38■□□□□ 0.53
SCARF1-205ENST00000571272 GDF10P55107 478 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CLDN10P78369 228 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 FAM182AQ5T1J6 154 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 DRICH1Q6PGQ1 229 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-205ENST00000571272 C3orf62Q6ZUJ4 267 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CLNKQ7Z7G1 428 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 SLC17A7Q9P2U7 560 aa18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CORO1CQ9ULV4 474 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-205ENST00000571272 CTDP1Q9Y5B0 961 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-205ENST00000571272 C2CD2LO14523 706 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 PTPN4P29074 926 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 CTCFP49711 727 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-205ENST00000571272 SMTNL2Q2TAL5 461 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 SLC45A4Q5BKX6 768 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 TFDP3Q5H9I0 405 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 DNAJC24Q6P3W2 148 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 MCPH1Q8NEM0 835 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 MIPEPQ99797 713 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 YIPF3Q9GZM5 350 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 DRG1Q9Y295 367 aaKnown RBP18.37■□□□□ 0.53
SCARF1-205ENST00000571272 CFAP69A5D8W1 941 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 BAATQ14032 418 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-205ENST00000571272 SPDYE2Q495Y8 402 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 EFHC2Q5JST6 749 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-205ENST00000571272 ATP6V0A1Q93050 837 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 PAFAH2Q99487 392 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 KANSL3Q9P2N6 904 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 SHOC2Q9UQ13 582 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 NFASCO94856 1347 aa18.37■□□□□ 0.53
SCARF1-205ENST00000571272 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 BRD2P25440 801 aaKnown RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 CDKN2BP42772 138 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 PRKCEQ02156 737 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 CYP4A22Q5TCH4 519 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ANO7Q6IWH7 933 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 RSBN1LQ6PCB5 846 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 PTPRN2Q92932 1015 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 PCDH9Q9HC56 1237 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ZFATQ9P243 1243 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ZNF646O15015 1829 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-205ENST00000571272 ZWINTO95229 277 aa18.36■□□□□ 0.53
SCARF1-205ENST00000571272 TROVE2P10155 538 aaKnown RBP eCLIP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms