RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ATF6P18850 670 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 DDX6P26196 483 aaKnown RBP eCLIP20.54■□□□□ 0.88
SCARF1-204ENST00000570902 ABCD1P33897 745 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 AVPR1AP37288 418 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 RAP1GAPP47736 663 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 TMEM119Q4V9L6 283 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 TMEM196Q5HYL7 178 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 CMTM8Q8IZV2 173 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 SPPL2BQ8TCT7 592 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 SLC46A2Q9BY10 475 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 GKN1Q9NS71 199 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 CPSF3Q9UKF6 684 aaKnown RBP20.54■□□□□ 0.88
SCARF1-204ENST00000570902 KIF3AQ9Y496 699 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 PCDHGA5Q9Y5G8 931 aa20.54■□□□□ 0.88
SCARF1-204ENST00000570902 CHD8Q9HCK8 2581 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 VWA3AA6NCI4 1184 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 SLC26A4O43511 780 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 NFICP08651 508 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 BFSP1Q12934 665 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 RUNX3Q13761 415 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 SF3A2Q15428 464 aaKnown RBP20.53■□□□□ 0.88
SCARF1-204ENST00000570902 CAMKK1Q8N5S9 505 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 MYCT1Q8N699 235 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 FAM83CQ9BQN1 747 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 REEP2Q9BRK0 252 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 SMG9Q9H0W8 520 aaKnown RBP20.53■□□□□ 0.88
SCARF1-204ENST00000570902 ASB7Q9H672 318 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 KIF9Q9HAQ2 790 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 PARVGQ9HBI0 331 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 C2CD2Q9Y426 696 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 MAP1BP46821 2468 aaKnown RBP20.53■□□□□ 0.88
SCARF1-204ENST00000570902 TSC2P49815 1807 aa20.53■□□□□ 0.88
SCARF1-204ENST00000570902 SOBPA7XYQ1 873 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 CYB561D2O14569 222 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 TRDMT1O14717 391 aaKnown RBP20.52■□□□□ 0.88
SCARF1-204ENST00000570902 FAM13AO94988 1023 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 PMLP29590 882 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 HOXC13P31276 330 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 PXNP49023 591 aaPredicted RBP20.52■□□□□ 0.88
SCARF1-204ENST00000570902 C8orf34Q49A92 452 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 ARL6IP4Q66PJ3 421 aaKnown RBP20.52■□□□□ 0.88
SCARF1-204ENST00000570902 MCTP1Q6DN14 999 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 FSTL4Q6MZW2 842 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 KBTBD6Q86V97 674 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 GIPC2Q8TF65 315 aa20.52■□□□□ 0.88
SCARF1-204ENST00000570902 TM4SF5O14894 197 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 HAPLN1P10915 354 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 TAF6P49848 677 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 ZNF131P52739 623 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 SHC2P98077 582 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 CCDC6Q16204 474 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 N4BP2L1Q5TBK1 243 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 STPG1Q5TH74 334 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 CC2D1AQ6P1N0 951 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 PKN3Q6P5Z2 889 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 GPBP1Q86WP2 473 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 DCP1BQ8IZD4 617 aaKnown RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 MAB21L3Q8N8X9 362 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 ZC3H10Q96K80 434 aaKnown RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 AK8Q96MA6 479 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 PYM1Q9BRP8 204 aaKnown RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 EBF3Q9H4W6 596 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 HPS4Q9NQG7 708 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 TDP1Q9NUW8 608 aa20.51■□□□□ 0.87
SCARF1-204ENST00000570902 ABI2Q9NYB9 513 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 KIF26AQ9ULI4 1882 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-204ENST00000570902 TRAK2O60296 914 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 DRD1P21728 446 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 NLRP12P59046 1061 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 FBXO43Q4G163 708 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 PLA2G2CQ5R387 149 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 USP13Q92995 863 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-204ENST00000570902 CALML4Q96GE6 196 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 CCSER1Q9C0I3 900 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 VPS45Q9NRW7 570 aa20.5■□□□□ 0.87
SCARF1-204ENST00000570902 RNF40O75150 1001 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 KRT18P05783 430 aaKnown RBP20.49■□□□□ 0.87
SCARF1-204ENST00000570902 MPLP40238 635 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 POU5F1Q01860 360 aaKnown RBP20.49■□□□□ 0.87
SCARF1-204ENST00000570902 PDGFRLQ15198 375 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 TRIM68Q6AZZ1 485 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 SLFN12LQ6IEE8 588 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 SLC39A4Q6P5W5 647 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 TMEM150AQ86TG1 271 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 LRRTM3Q86VH5 581 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 MRPS31Q92665 395 aaKnown RBP20.49■□□□□ 0.87
SCARF1-204ENST00000570902 RXFP3Q9NSD7 469 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 DPP3Q9NY33 737 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 CCL26Q9Y258 94 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 PCDHB5Q9Y5E4 795 aa20.49■□□□□ 0.87
SCARF1-204ENST00000570902 OTOL1A6NHN0 477 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-204ENST00000570902 TBCAO75347 108 aaKnown RBP20.48■□□□□ 0.87
SCARF1-204ENST00000570902 EGFP01133 1207 aa20.48■□□□□ 0.87
SCARF1-204ENST00000570902 F11P03951 625 aa20.48■□□□□ 0.87
SCARF1-204ENST00000570902 CSH1P0DML2 217 aa20.48■□□□□ 0.87
SCARF1-204ENST00000570902 CSH2P0DML3 217 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms