RNA–Protein interactions for RNA: ENST00000570856.1

GABARAP-202, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2

Gene GABARAP, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-202ENST00000570856 CAPN15O75808 1086 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 NDUFA10O95299 355 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 GZMAP12544 262 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 LMO2P25791 158 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 GNA15P30679 374 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 CDH5P33151 784 aaPredicted RBP14.39□□□□□ -0.11
GABARAP-202ENST00000570856 CYLC1P35663 651 aaPredicted RBP14.39□□□□□ -0.11
GABARAP-202ENST00000570856 PPM1AP35813 382 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 PDE6CP51160 858 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 KIF11P52732 1056 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 STILQ15468 1287 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 CNGA2Q16280 664 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 TDRD12Q587J7 1177 aaKnown RBP14.39□□□□□ -0.11
GABARAP-202ENST00000570856 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 METTL23Q86XA0 190 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 LNX1Q8TBB1 728 aaPredicted RBP14.39□□□□□ -0.11
GABARAP-202ENST00000570856 HASPINQ8TF76 798 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 TFAP2BQ92481 460 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 PKMYT1Q99640 499 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 ZBED2Q9BTP6 218 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 DNAI2Q9GZS0 605 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 SNX25Q9H3E2 840 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 CHST7Q9NS84 486 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 STK39Q9UEW8 545 aa14.39□□□□□ -0.11
GABARAP-202ENST00000570856 TNRC18O15417 2968 aaPredicted RBP14.39□□□□□ -0.11
GABARAP-202ENST00000570856 PDE4DIPQ5VU43 2346 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 A0A087X0T9 212 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 A8MXQ7 604 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 I3L4J1 428 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 O00370 1275 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 ZNF263O14978 683 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 CLSTN1O94985 981 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 CYP1A1P04798 512 aaPredicted RBP14.38□□□□□ -0.11
GABARAP-202ENST00000570856 FAM228BP0C875 321 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 UNGP13051 313 aaPredicted RBP14.38□□□□□ -0.11
GABARAP-202ENST00000570856 PCSK1P29120 753 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 PLCB3Q01970 1234 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 MTF1Q14872 753 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 ZNF394Q53GI3 561 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 OVOS1Q6IE37 1185 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 FAM171BQ6P995 826 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 LCLAT1Q6UWP7 414 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 TRIM72Q6ZMU5 477 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 VPS36Q86VN1 386 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 SLC20A1Q8WUM9 679 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
GABARAP-202ENST00000570856 PCDHB18PQ96TA0 734 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 VN1R3Q9BXE9 311 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 OXCT2Q9BYC2 517 aaPredicted RBP14.38□□□□□ -0.11
GABARAP-202ENST00000570856 LHX5Q9H2C1 402 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 DDX43Q9NXZ2 648 aaKnown RBP14.38□□□□□ -0.11
GABARAP-202ENST00000570856 SPG21Q9NZD8 308 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.38□□□□□ -0.11
GABARAP-202ENST00000570856 ADAMTS1Q9UHI8 967 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 CDH9Q9ULB4 789 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 ZKSCAN5Q9Y2L8 839 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 MYH10P35580 1976 aa14.38□□□□□ -0.11
GABARAP-202ENST00000570856 C5orf67F2Z3F1 127 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 H0YGN5 161 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 MED7O43513 233 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 TLL1O43897 1013 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 AKR1B10O60218 316 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 SOD2P04179 222 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 MMEP08473 750 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 PTPN1P18031 435 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 TNFAIP3P21580 790 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 TKTP29401 623 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 PBX3P40426 434 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 YWHAHQ04917 246 aaPredicted RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 SGO2Q562F6 1265 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 C10orf76Q5T2E6 689 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 KIAA0319Q5VV43 1072 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 ZNF662Q6ZS27 426 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 DDX53Q86TM3 631 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 ACOT1Q86TX2 421 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 KIAA1524Q8TCG1 905 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 HNRNPABQ99729 332 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 HERC2P3Q9BVR0 1158 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 PLVAPQ9BX97 442 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 ISCUQ9H1K1 167 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 DPEP3Q9H4B8 488 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 REXO2Q9Y3B8 237 aaKnown RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 RWDD3Q9Y3V2 267 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 PCDHA11Q9Y5I1 949 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 TIMM13Q9Y5L4 95 aaPredicted RBP14.37□□□□□ -0.11
GABARAP-202ENST00000570856 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
GABARAP-202ENST00000570856 LCHNA4D1U4 455 aa14.36□□□□□ -0.11
GABARAP-202ENST00000570856 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
GABARAP-202ENST00000570856 HCRTO43612 131 aa14.36□□□□□ -0.11
GABARAP-202ENST00000570856 LSM8O95777 96 aaKnown RBP14.36□□□□□ -0.11
GABARAP-202ENST00000570856 CALCAP01258 141 aa14.36□□□□□ -0.11
GABARAP-202ENST00000570856 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms