RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 CCDC112Q8NEF3 446 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 OR6B3Q8NGW1 331 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 LMO3Q8TAP4 145 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 RABGGTAQ92696 567 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 JAKMIP2Q96AA8 810 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ELMO3Q96BJ8 720 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF689Q96CS4 500 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 TNIP3Q96KP6 325 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 SENP8Q96LD8 212 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ARID3AQ99856 593 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PAAF1Q9BRP4 392 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 STK33Q9BYT3 514 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 BCO2Q9BYV7 579 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 TTYH3Q9C0H2 523 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PDCL3Q9H2J4 239 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 RC3H2Q9HBD1 1191 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 SIX2Q9NPC8 291 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 CISHQ9NSE2 258 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ABHD10Q9NUJ1 306 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 SEPT11Q9NVA2 429 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 GDAP2Q9NXN4 497 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 SPG21Q9NZD8 308 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PUF60Q9UHX1 559 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 MSRAQ9UJ68 235 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 CAPN11Q9UMQ6 739 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 MRPL42Q9Y6G3 142 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ATP8B3O60423 1300 aa7.02□□□□□ -1.28
CTDNEP1-204ENST00000570484 TRIP12Q14669 1992 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 ALPK3Q96L96 1907 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 A8MXQ7 604 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 I3L4J1 428 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SYN3O14994 580 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 MED7O43513 233 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 LPXNO60711 386 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CILPO75339 1184 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 TACC1O75410 805 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 GFPT2O94808 682 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 NOL4O94818 638 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 GALTP07902 379 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 WEE2P0C1S8 567 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CCNYL3P0C7X3 344 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CD19P15391 556 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 TYMPP19971 482 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 GNA15P30679 374 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 BRCC3P46736 316 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 LHX1P48742 406 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 AARSP49588 968 aaKnown RBP eCLIP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 ADKP55263 362 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 HTRA4P83105 476 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 TSPY1Q01534 308 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 KRT17Q04695 432 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 YWHAHQ04917 246 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 PTK2Q05397 1052 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 KLHL30Q0D2K2 578 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SHHQ15465 462 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 OVOS1Q6IE37 1185 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 DPH6Q7L8W6 267 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CCDC186Q7Z3E2 898 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CEP57Q86XR8 500 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 TDHQ8IZJ6 230 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 THEM5Q8N1Q8 247 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 TMEM130Q8N3G9 435 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 PDCL2Q8N4E4 241 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 OR8K1Q8NGG5 319 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CXorf38Q8TB03 319 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SPATA18Q8TC71 538 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SHC3Q92529 594 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SYN2Q92777 582 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 KAT5Q92993 513 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 PDLIM2Q96JY6 352 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SUSD3Q96L08 255 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 SAMD11Q96NU1 681 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 DNAJC7Q99615 494 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 GDF15Q99988 308 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 C11orf84Q9BUA3 381 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 NT5C1AQ9BXI3 368 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 NAA15Q9BXJ9 866 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 DDX43Q9NXZ2 648 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 BARX2Q9UMQ3 279 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 L1RE1Q9UN81 338 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 CEP83Q9Y592 693 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 PCDHA11Q9Y5I1 949 aa7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 BZW2Q9Y6E2 419 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-204ENST00000570484 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 NT5C1B-RDH14C9J2C7 533 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 F8W810 466 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 H7C4K7 107 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 M0QZQ0 153 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 THAP12O43422 761 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 B4GALT3O60512 393 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SERPING1P05155 500 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 ITGB1P05556 798 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CA3P07451 260 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 PAEPP09466 180 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 PNMA6AP0CW24 399 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms