RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 AOC3Q16853 763 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 C3orf36Q3SXR2 165 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 DACT2Q5SW24 774 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 FAM180AQ6UWF9 173 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 BTNL9Q6UXG8 535 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 TTC7BQ86TV6 843 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 SLC41A1Q8IVJ1 513 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 MB21D2Q8IYB1 491 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-222ENST00000570139 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 ESR2Q92731 530 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 MISP3Q96FF7 219 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 ZNF274Q96GC6 653 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-222ENST00000570139 APIPQ96GX9 242 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PTPN18Q99952 460 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PRDM12Q9H4Q4 367 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 AGO4Q9HCK5 861 aaKnown RBP8.01□□□□□ -1.13
CNOT1-222ENST00000570139 GPRC5BQ9NZH0 403 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 LMCD1Q9NZU5 365 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PGAP2Q9UHJ9 254 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 HDAC9Q9UKV0 1011 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 KIF3AQ9Y496 699 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PCDHB6Q9Y5E3 794 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 SNX13Q9Y5W8 968 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 NR2E3Q9Y5X4 410 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 MYH1P12882 1939 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 ERICH2A1L162 156 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 FAM171A2A8MVW0 826 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 TLR5O60602 858 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 HSD3B1P14060 373 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 FAHP16930 419 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 XPAP23025 273 aaPredicted RBP8□□□□□ -1.13
CNOT1-222ENST00000570139 BDNFP23560 247 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 RPS12P25398 132 aaKnown RBP8□□□□□ -1.13
CNOT1-222ENST00000570139 DDIT3P35638 169 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 CHKAP35790 457 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 LIFRP42702 1097 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 RAB1AP62820 205 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 GRIN1Q05586 938 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 DBPQ10586 325 aaPredicted RBP8□□□□□ -1.13
CNOT1-222ENST00000570139 IKZF1Q13422 519 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 TNIP1Q15025 636 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 SWSAP1Q6NVH7 229 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 OLFM4Q6UX06 510 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 UNQ6494/PRO21346Q6UXR6 183 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 Q6ZUG5 572 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 STOX1Q6ZVD7 989 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 GPR155Q7Z3F1 870 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 TEX11Q8IYF3 940 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 AGBL3Q8NEM8 1001 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 GAB3Q8WWW8 586 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 RIN2Q8WYP3 895 aaPredicted RBP8□□□□□ -1.13
CNOT1-222ENST00000570139 PEX11GQ96HA9 241 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 LLPHQ9BRT6 129 aaKnown RBP8□□□□□ -1.13
CNOT1-222ENST00000570139 MTG2Q9H4K7 406 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 DBNDD1Q9H9R9 158 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 AS3MTQ9HBK9 375 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 BTBD7Q9P203 1132 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 VAV3Q9UKW4 847 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 ANGEL1Q9UNK9 670 aaKnown RBP8□□□□□ -1.13
CNOT1-222ENST00000570139 SCN9AQ15858 1988 aa8□□□□□ -1.13
CNOT1-222ENST00000570139 BAZ2AQ9UIF9 1905 aaKnown RBP7.99□□□□□ -1.13
CNOT1-222ENST00000570139 DICER1Q9UPY3 1922 aaKnown RBP7.99□□□□□ -1.13
CNOT1-222ENST00000570139 NID2Q14112 1375 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 KPNA5O15131 536 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 ORC4O43929 436 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 PTMSP20962 102 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 MAP2K6P52564 334 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 HAND2P61296 217 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 DYNLL1P63167 89 aaKnown RBP7.99□□□□□ -1.13
CNOT1-222ENST00000570139 TOB2Q14106 344 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-222ENST00000570139 PPP2R5BQ15173 497 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 TLDC1Q6P9B6 456 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 CTR9Q6PD62 1173 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 APOA5Q6Q788 366 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 SGMS1Q86VZ5 419 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 IQCA1Q86XH1 822 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 TBC1D10CQ8IV04 446 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 SDR42E1Q8WUS8 393 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 GTF3C6Q969F1 213 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 MYLK2Q9H1R3 596 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 CARS2Q9HA77 564 aaKnown RBP7.99□□□□□ -1.13
CNOT1-222ENST00000570139 MAP3K20Q9NYL2 800 aaKnown RBP7.99□□□□□ -1.13
CNOT1-222ENST00000570139 TMEM59LQ9UK28 342 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 USP18Q9UMW8 372 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 WASF3Q9UPY6 502 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 CORO2BQ9UQ03 480 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 JAG2Q9Y219 1238 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 FLT1P17948 1338 aa7.99□□□□□ -1.13
CNOT1-222ENST00000570139 MYH8P13535 1937 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 PHGDHO43175 533 aaKnown RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 PRKAB2O43741 272 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 PFKFB2O60825 505 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 CDKL5O76039 1030 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 HLA-DOAP06340 250 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ABCB4P21439 1286 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 PTGS1P23219 599 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ARL4AP40617 200 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms