RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 ZMYM5Q9UJ78 669 aa13.36□□□□□ -0.27
SCAMP2-212ENST00000569904 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
SCAMP2-212ENST00000569904 PIAS3Q9Y6X2 628 aa13.36□□□□□ -0.27
SCAMP2-212ENST00000569904 HELZP42694 1942 aaKnown RBP13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 SOBPA7XYQ1 873 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 EXTL3O43909 919 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 SOAT2O75908 522 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 CHRNB1P11230 501 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 GABRR2P28476 465 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 CDC25CP30307 473 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 MTAPQ13126 283 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 DCP1BQ8IZD4 617 aaKnown RBP13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 TMEM86AQ8N2M4 240 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 RUBCNQ92622 972 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 SAAL1Q96ER3 474 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 PKMYT1Q99640 499 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 CBWD1Q9BRT8 395 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 EPC1Q9H2F5 836 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 CUEDC2Q9H467 287 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 SLITRK6Q9H5Y7 841 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 TASP1Q9H6P5 420 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 C8orf33Q9H7E9 229 aaPredicted RBP13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 PANK4Q9NVE7 773 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 TBC1D7Q9P0N9 293 aa13.35□□□□□ -0.27
SCAMP2-212ENST00000569904 MYBPHLA2RUH7 354 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 GABRDO14764 452 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 PAPSS2O95340 614 aaPredicted RBP13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 YEATS4O95619 227 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 ITGB3P05106 788 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 IDEP14735 1019 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 HMGA1P17096 107 aaKnown RBP13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 POLR2BP30876 1174 aaKnown RBP13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 ID4P47928 161 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 CSTF1Q05048 431 aaKnown RBP13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 VEPH1Q14D04 833 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 MGAT5BQ3V5L5 792 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 ARHGAP15Q53QZ3 475 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 ERMP1Q7Z2K6 904 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 LIMS2Q7Z4I7 341 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 TMEM150AQ86TG1 271 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 SNX21Q969T3 373 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 SEPT5Q99719 369 aaPredicted RBP13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 LRRC27Q9C0I9 530 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 EP300Q09472 2414 aaPredicted RBP13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
SCAMP2-212ENST00000569904 SPTLC2O15270 562 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 EIF3DO15371 548 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 F11P03951 625 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 DDX6P26196 483 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 HOXD13P35453 343 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 CCR3P51677 355 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 TFAMQ00059 246 aaKnown RBP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 GAS6Q14393 721 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 DPH6Q7L8W6 267 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 RALGPS2Q86X27 583 aaPredicted RBP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 GPD1LQ8N335 351 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 CSGALNACT1Q8TDX6 532 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 TRIM9Q9C026 710 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 TMLHEQ9NVH6 421 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 NDRG2Q9UN36 371 aaKnown RBP13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 AGAP1Q9UPQ3 857 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 KIAA1549LQ6ZVL6 1849 aa13.33□□□□□ -0.28
SCAMP2-212ENST00000569904 PRPF6O94906 941 aaKnown RBP13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 CCNE1P24864 410 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 CTHP32929 405 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 NRLP54845 237 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 TSPY1Q01534 308 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 EHHADHQ08426 723 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 STK38Q15208 465 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 SYCP3Q8IZU3 236 aa13.32□□□□□ -0.28
SCAMP2-212ENST00000569904 TOP6BLQ8N6T0 577 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms