RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-220ENST00000569827 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-220ENST00000569827 ARHGAP15Q53QZ3 475 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 DGKKQ5KSL6 1271 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 SCARA3Q6AZY7 606 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 ARMCX5Q6P1M9 558 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-220ENST00000569827 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
CAPN3-220ENST00000569827 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 EBF3Q9H4W6 596 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 TASP1Q9H6P5 420 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-220ENST00000569827 IGF2RP11717 2491 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 ASPMQ8IZT6 3477 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 EGFP01133 1207 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 TAF12Q16514 161 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 ITPRIPL2Q3MIP1 535 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 WSCD1Q658N2 575 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 TCEAL6Q6IPX3 200 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 ZSWIM2Q8NEG5 633 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 TCEAL3Q969E4 200 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 HHIPQ96QV1 700 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 ZCWPW1Q9H0M4 648 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 FBRSL1Q9HCM7 1045 aaKnown RBP13.06□□□□□ -0.32
CAPN3-220ENST00000569827 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 BLOC1S4Q9NUP1 217 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 TMLHEQ9NVH6 421 aa13.06□□□□□ -0.32
CAPN3-220ENST00000569827 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
CAPN3-220ENST00000569827 CPSF3Q9UKF6 684 aaKnown RBP13.06□□□□□ -0.32
CAPN3-220ENST00000569827 MAGED2Q9UNF1 606 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-220ENST00000569827 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
CAPN3-220ENST00000569827 WDFY3Q8IZQ1 3526 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 A0A0B4J269 797 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 ANO9A1A5B4 782 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 PIRO00625 290 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 CYB561D2O14569 222 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 XPOTO43592 962 aaKnown RBP13.05□□□□□ -0.32
CAPN3-220ENST00000569827 HCRTO43612 131 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 LRP3O75074 770 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 PAPSS2O95340 614 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-220ENST00000569827 KRT18P05783 430 aaKnown RBP13.05□□□□□ -0.32
CAPN3-220ENST00000569827 MCM2P49736 904 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 MLLT6P55198 1093 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-220ENST00000569827 WNT7BP56706 349 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 VEPH1Q14D04 833 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
CAPN3-220ENST00000569827 TXNDC8Q6A555 127 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 ITIH5Q86UX2 942 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 EFCAB13Q8IY85 973 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 MSANTD3Q96H12 275 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 GCNAQ96QF7 691 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 FIZ1Q96SL8 496 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 PI4K2AQ9BTU6 479 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 ASB3Q9Y575 518 aa13.05□□□□□ -0.32
CAPN3-220ENST00000569827 AKAP13Q12802 2813 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 ANTXRLA6NF34 631 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 DCLK1O15075 740 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 TRAK2O60296 914 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 RNF40O75150 1001 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 RPP40O75818 363 aaKnown RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 CD2BP2O95400 341 aaKnown RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 PIGRP01833 764 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 CYP11A1P05108 521 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 ADRB2P07550 413 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 PLCG1P19174 1290 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 ACAT1P24752 427 aaKnown RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 CDC25CP30307 473 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 NLRP12P59046 1061 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 ADALQ6DHV7 355 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 IL31Q6EBC2 164 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 C12orf50Q8NA57 414 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 OXCT2Q9BYC2 517 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-220ENST00000569827 ODF2LQ9ULJ1 636 aa13.04□□□□□ -0.32
CAPN3-220ENST00000569827 H0YCG3 227 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 TADA3O75528 432 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-220ENST00000569827 HMGA1P17096 107 aaKnown RBP13.03□□□□□ -0.32
CAPN3-220ENST00000569827 CNR2P34972 360 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 TAF6P49848 677 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 BFSP1Q12934 665 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms