RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NOSIPQ9Y314 301 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 LACTBL1A8MY62 500 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 ZBTB14O43829 449 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 UPP2O95045 317 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 STMN1P16949 149 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 HNF4AP41235 474 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 PURAQ00577 322 aaKnown RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 FUT2Q10981 343 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 GEN1Q17RS7 908 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 CCDC40Q4G0X9 1142 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 CCDC38Q502W7 563 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 C4orf50Q6ZRC1 276 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 KCTD1Q719H9 257 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 KIAA1328Q86T90 577 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 C3orf20Q8ND61 904 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 MCPH1Q8NEM0 835 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 DDI1Q8WTU0 396 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 LRRC45Q96CN5 670 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 ZBED3Q96IU2 234 aaPredicted RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 DDX23Q9BUQ8 820 aaKnown RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 ZCWPW1Q9H0M4 648 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 IL17RBQ9NRM6 502 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMG1-217ENST00000569764 PDP2Q9P2J9 529 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 DKK3Q9UBP4 350 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 GPR34Q9UPC5 381 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 COL2A1P02458 1487 aaPredicted RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 FOCADQ5VW36 1801 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 SKAP2O75563 359 aaPredicted RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 TIMP1P01033 207 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 MCM3P25205 808 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 BYSLQ13895 437 aaKnown RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 CLPPQ16740 277 aaPredicted RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 MINDY4Q4G0A6 757 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 TMEM31Q5JXX7 168 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 SPATA1Q5VX52 437 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 SYCP3Q8IZU3 236 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 THEM5Q8N1Q8 247 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 TXLNBQ8N3L3 684 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 PSPC1Q8WXF1 523 aaKnown RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 BAP1Q92560 729 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 TUBA1CQ9BQE3 449 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 TRPV6Q9H1D0 765 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 SUGCTQ9HAC7 445 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 HPF1Q9NWY4 346 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 ATPIF1Q9UII2 106 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 KCNJ14Q9UNX9 436 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMG1-217ENST00000569764 NAV1Q8NEY1 1877 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 KIAA0100Q14667 2235 aaKnown RBP7.03□□□□□ -1.28
SMG1-217ENST00000569764 PLEKHA8P1O95397 391 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 MBD3O95983 291 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 ZNF3P17036 446 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 STAT5BP51692 787 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 MYL6P60660 151 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 RAC1P63000 192 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 GRIN1Q05586 938 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 LRMPQ12912 555 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 MFSD10Q14728 455 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 SURF1Q15526 300 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 Q4G0T1 1027 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 TCEAL8Q8IYN2 117 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 B4GALNT2Q8NHY0 566 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 ANLNQ9NQW6 1124 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 SLC38A7Q9NVC3 462 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 DUSP12Q9UNI6 340 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 MYH1P12882 1939 aa7.03□□□□□ -1.28
SMG1-217ENST00000569764 EIF3CLB5ME19 914 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 SMPD2O60906 423 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ASGR1P07306 291 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 HEXBP07686 556 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ANXA13P27216 316 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TOB1P50616 345 aaPredicted RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 KRT85P78386 507 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 KCNA10Q16322 511 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 CYP4A22Q5TCH4 519 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 NUP54Q7Z3B4 507 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 CBARPQ8N350 705 aaPredicted RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 HDAC7Q8WUI4 952 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ATXN2LQ8WWM7 1075 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 KCTD13Q8WZ19 329 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 HDAC2Q92769 488 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 CCDC51Q96ER9 411 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 PIGSQ96S52 555 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 EIF3CQ99613 913 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 DDX50Q9BQ39 737 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 NIFKQ9BYG3 293 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 NIF3L1Q9GZT8 377 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZWILCHQ9H900 591 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ABCB6Q9NP58 842 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 RCOR1Q9UKL0 485 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 NRCAMQ92823 1304 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 MEN1O00255 615 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ATP2A1O14983 1001 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 CETN3O15182 167 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 TEX28O15482 410 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 ATP5BP06576 529 aaKnown RBP7.02□□□□□ -1.29
SMG1-217ENST00000569764 ZNF543Q08ER8 600 aa7.02□□□□□ -1.29
SMG1-217ENST00000569764 GPM6BQ13491 265 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms