RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 VDRP11473 427 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 UNGP13051 313 aaPredicted RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 SCNN1GP51170 649 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 NDST1P52848 882 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 RAD23BP54727 409 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 HADHBP55084 474 aaKnown RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 CDH8P55286 799 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 SOX4Q06945 474 aaPredicted RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 ZNF394Q53GI3 561 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 GLB1LQ6UWU2 654 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 TOP6BLQ8N6T0 577 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 APPL2Q8NEU8 664 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 URGCPQ8TCY9 931 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 BADQ92934 168 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 ZNF653Q96CK0 615 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 HEXIM2Q96MH2 286 aaKnown RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 UROC1Q96N76 676 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 THAP2Q9H0W7 228 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 SDCBP2Q9H190 292 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 WNT8AQ9H1J5 351 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 SNX25Q9H3E2 840 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 ELAC1Q9H777 363 aaKnown RBP8.12□□□□□ -1.11
CDH13-214ENST00000569455 L2HGDHQ9H9P8 463 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 TAS2R14Q9NYV8 317 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 CTTNBP2NLQ9P2B4 639 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 UVRAGQ9P2Y5 699 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 CDC23Q9UJX2 597 aa8.12□□□□□ -1.11
CDH13-214ENST00000569455 ABHD14A-ACY1A0A1B0GW23 586 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MEIS3P2A8K0S8 358 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PODXLO00592 558 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 RIOK3O14730 519 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 HOXA2O43364 376 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 NBNO60934 754 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PALMO75781 387 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MTA2O94776 668 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 SLU7O95391 586 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 FGBP02675 491 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 CYP1A2P05177 515 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 FOSL2P15408 326 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PRLRP16471 622 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 TCP1P17987 556 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 IBSPP21815 317 aaPredicted RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 ITGB8P26012 769 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 CDH5P33151 784 aaPredicted RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 CYP2C18P33260 490 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 LILRA4P59901 499 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 NOMO3P69849 1222 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 FAM189BP81408 668 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 C1QBPQ07021 282 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 TUSC3Q13454 348 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 IKBKEQ14164 716 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 CNGA2Q16280 664 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PLEKHG4Q58EX7 1191 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 NAA35Q5VZE5 725 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PAPD7Q5XG87 772 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 CNKSR3Q6P9H4 555 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PASD1Q8IV76 773 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MCOLN2Q8IZK6 566 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 TMEM86AQ8N2M4 240 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 SLC4A11Q8NBS3 891 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 GSTCDQ8NEC7 633 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MNS1Q8NEH6 495 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MYRIPQ8NFW9 859 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 OR6B3Q8NGW1 331 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 TPCN2Q8NHX9 752 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 SLC35G2Q8TBE7 412 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PHOSPHO2Q8TCD6 241 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 WHAMMQ8TF30 809 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MYLIPQ8WY64 445 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 RSPH1Q8WYR4 309 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 CYFIP2Q96F07 1278 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 OSBPL7Q9BZF2 842 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 ELOVL4Q9GZR5 314 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MIS12Q9H081 205 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 LHX5Q9H2C1 402 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 GOLGA2P5Q9HBQ8 144 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MRPL47Q9HD33 250 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 AVENQ9NQS1 362 aaPredicted RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 RNF19AQ9NV58 838 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 TMEM161AQ9NX61 479 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 ADAM22Q9P0K1 906 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 CNOT8Q9UFF9 292 aaKnown RBP8.11□□□□□ -1.11
CDH13-214ENST00000569455 LCMT1Q9UIC8 334 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 SALL4Q9UJQ4 1053 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 LRFN2Q9ULH4 789 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 STRIP2Q9ULQ0 834 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 HYOU1Q9Y4L1 999 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 MRFAP1Q9Y605 127 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 SAR1BQ9Y6B6 198 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 SCINQ9Y6U3 715 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms