RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 GH1P01241 217 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 CLDN10P78369 228 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 GPS1Q13098 491 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 EFCAB12Q6NXP0 572 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 BRSK2Q8IWQ3 736 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 GRK7Q8WTQ7 553 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 PGM2Q96G03 612 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 RUNDC3BQ96NL0 473 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 ACO2Q99798 780 aaKnown RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 JPH2Q9BR39 696 aaPredicted RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 NIFKQ9BYG3 293 aaKnown RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 MINDY3Q9H8M7 445 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 SCINQ9Y6U3 715 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 KIF13BQ9NQT8 1826 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 SGK1O00141 431 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 ASS1P00966 412 aaKnown RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 AGTP01019 485 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 TXNP10599 105 aaKnown RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 DRD4P21917 467 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 IVDP26440 423 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 GBP1P32455 592 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 ICAM3P32942 547 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 RFC5P40937 340 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 CETN2P41208 172 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 MMP13P45452 471 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 ARSEP51690 589 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 TMED2Q15363 201 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 C11orf91Q3C1V1 193 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 DENND1BQ6P3S1 775 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 METTL7BQ6UX53 244 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 C12orf50Q8NA57 414 aaPredicted RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 CPB2Q96IY4 423 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 OSBPL7Q9BZF2 842 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 FAM129AQ9BZQ8 928 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 WHRNQ9P202 907 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 ADGRA2Q96PE1 1338 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 OGTO15294 1046 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 SPAG7O75391 227 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TTC4O95801 387 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TGFB3P10600 412 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 CETPP11597 493 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 MMP8P22894 467 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PEX19P40855 299 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 NRLP54845 237 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PTP4A2Q12974 167 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 KCTD2Q14681 263 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 FASTKD3Q14CZ7 662 aaKnown RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TARBP2Q15633 366 aaKnown RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 FAM133BQ5BKY9 247 aaKnown RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 ATF7IP2Q5U623 682 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TAOK1Q7L7X3 1001 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 RIOX2Q8IUF8 465 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TMEM35BQ8NCS4 154 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 MAIP1Q8WWC4 291 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 RBM15Q96T37 977 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 NIF3L1Q9GZT8 377 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 VPS37BQ9H9H4 285 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 IP6K2Q9UHH9 426 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TCP11X1B4DZS4 312 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 DNM1LO00429 736 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 GRAP2O75791 330 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 CAPN15O75808 1086 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TNNC2P02585 160 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 FAM163BP0C2L3 166 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 BRAFP15056 766 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PSMA2P25787 234 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 RFC1P35251 1148 aaPredicted RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 ZNF252P-AS1Q0IIN9 211 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 BIRC2Q13490 618 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PTK6Q13882 451 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TRMT10CQ7L0Y3 403 aaKnown RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 CCDC13Q8IYE1 715 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 WDTC1Q8N5D0 677 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 CCDC89Q8N998 374 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 JOSD2Q8TAC2 188 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 GPR20Q99678 358 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 SEZ6LQ9BYH1 1024 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 RNPEPQ9H4A4 650 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 ZNF408Q9H9D4 720 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 SAMD15Q9P1V8 674 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 KLF15Q9UIH9 416 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TMEM191CA6NGB0 347 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PSTPIP1O43586 416 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 VTNP04004 478 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 ITGB3P05106 788 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 CYP2C8P10632 490 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 MNAT1P51948 309 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PSMC1P62191 440 aaKnown RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 C1QBPQ07021 282 aaKnown RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 KLF1Q13351 362 aaPredicted RBP9.24□□□□□ -0.93
LINC00558-201ENST00000569422 PLCB4Q15147 1175 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 SGSM1Q2NKQ1 1148 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 IER5Q5VY09 327 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 NUGGCQ68CJ6 796 aa9.24□□□□□ -0.93
LINC00558-201ENST00000569422 TRIM72Q6ZMU5 477 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms