RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 IL17RDQ8NFM7 739 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 ASB10Q8WXI3 467 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 JDP2Q8WYK2 163 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 NACC2Q96BF6 587 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 PSMD1Q99460 953 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 TLR10Q9BXR5 811 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 RTFDC1Q9BY42 306 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 RHOBTB2Q9BYZ6 727 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 WDR11Q9BZH6 1224 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 IKZF4Q9H2S9 585 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 SERHL2Q9H4I8 314 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 MYH16Q9H6N6 1097 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 CALCOCO1Q9P1Z2 691 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 THRAP3Q9Y2W1 955 aaKnown RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 CFAP20Q9Y6A4 193 aaKnown RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 IQGAP3Q86VI3 1631 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 BLMP54132 1417 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 ANKRD50Q9ULJ7 1429 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 PIK3R4Q99570 1358 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 ABCA3Q99758 1704 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 TNS1Q9HBL0 1735 aaKnown RBP4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 RPRD2Q5VT52 1461 aaKnown RBP4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 FOXN1O15353 648 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 AKAP10O43572 662 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 SLC43A1O75387 559 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 HAUS5O94927 633 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 MTHFD1P11586 935 aaKnown RBP4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 RAB27AP51159 221 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 CXADRP78310 365 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 GUCY1B3Q02153 619 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 PTPAQ15257 358 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 EZH2Q15910 746 aaKnown RBP4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 ODR4Q5SWX8 454 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 GORABQ5T7V8 394 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 LAIR1Q6GTX8 287 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 GADL1Q6ZQY3 521 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 UNC5CLQ8IV45 518 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 Q8NA96 180 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 NLGN4YQ8NFZ3 816 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 NUP133Q8WUM0 1156 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 CHFRQ96EP1 664 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 TTPALQ9BTX7 342 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 ALOXE3Q9BYJ1 711 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 REXO4Q9GZR2 422 aaKnown RBP4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 RNPEPQ9H4A4 650 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 STK26Q9P289 416 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 PCDHA3Q9Y5H8 950 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 DCCP43146 1447 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 PTCH1Q13635 1447 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 IFT172Q9UG01 1749 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 NEXMIFQ5QGS0 1516 aa4.26□□□□□ -1.73
HMGB1P6-201ENST00000569046 POLR2AP24928 1970 aaKnown RBP4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 MYOM2P54296 1465 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PXDNQ92626 1479 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 USP32Q8NFA0 1604 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PPLO60437 1756 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PRSS29PA6NIE9 313 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PPFIA4O75335 1185 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 CDKL5O76039 1030 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 GPANK1O95872 356 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 HLA-DOAP06340 250 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PROZP22891 400 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 TBX4P57082 545 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 TGFB2P61812 414 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 FSTL1Q12841 308 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PIN1Q13526 163 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 CYP2A13Q16696 494 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 ATP2B3Q16720 1220 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 TMED8Q6PL24 325 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 SLC4A10Q6U841 1118 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 Q6YL49 198 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 KRT27Q7Z3Y8 459 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 MRGPRGQ86SM5 289 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 GPR149Q86SP6 731 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 NRAPQ86VF7 1730 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 BEND2Q8NDZ0 799 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 TMIEQ8NEW7 156 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 RNF31Q96EP0 1072 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 KLHL32Q96NJ5 620 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 AGAP2Q99490 1192 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 PRRX2Q99811 253 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 C1orf43Q9BWL3 253 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 SYBUQ9NX95 663 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 JKAMPQ9P055 326 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 NUP155O75694 1391 aa4.25□□□□□ -1.73
HMGB1P6-201ENST00000569046 ADGRL2O95490 1459 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 FMN2Q9NZ56 1722 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 NWD2Q9ULI1 1742 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 EGR2P11161 476 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 AKAP5P24588 427 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 MAP2K6P52564 334 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 INHBCP55103 352 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 COL10A1Q03692 680 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 NOGQ13253 232 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 ZNF267Q14586 743 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 ZNF365Q70YC5 407 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 KRT28Q7Z3Y7 464 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 CCDC146Q8IYE0 955 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms