RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TRDMT1O14717 391 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 ATF6P18850 670 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 ZNF131P52739 623 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 TNK2Q07912 1038 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 RUNX3Q13761 415 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 FBXO43Q4G163 708 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 ARSHQ5FYA8 562 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 MYCT1Q8N699 235 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 CALML4Q96GE6 196 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 ZC3H10Q96K80 434 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 FAM83CQ9BQN1 747 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 REEP2Q9BRK0 252 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 SLC46A2Q9BY10 475 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
HERPUD1-215ENST00000568676 VWA3AA6NCI4 1184 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 PPEF2O14830 753 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 EXTL3O43909 919 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 TRAK2O60296 914 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 SOAT2O75908 522 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 FAM13AO94988 1023 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 CCDC192P0DO97 292 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 DRD1P21728 446 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 TAF6P49848 677 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 SHC2P98077 582 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 CYP4F8P98187 520 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 BFSP1Q12934 665 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 NT5DC4Q86YG4 428 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 FAM212AQ96EL1 285 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 ARRDC1-AS1Q9H2J1 176 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 C2orf42Q9NWW7 574 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
HERPUD1-215ENST00000568676 CYB561D2O14569 222 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 TM4SF5O14894 197 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 AXIN1O15169 862 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 NFICP08651 508 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 PMLP29590 882 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 GTF2BQ00403 316 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 ZNF268Q14587 947 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 PDGFRLQ15198 375 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 MCTP1Q6DN14 999 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 CCDC26Q8TAB7 109 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 PLIN2Q99541 437 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 UXTQ9UBK9 157 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 GREB1Q4ZG55 1949 aa17.01■□□□□ 0.31
HERPUD1-215ENST00000568676 TSC2P49815 1807 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 CSH1P0DML2 217 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 CSH2P0DML3 217 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 UBA7P41226 1012 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 PNPLA4P41247 253 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 NLRP12P59046 1061 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 TSPY1Q01534 308 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
HERPUD1-215ENST00000568676 NFE2Q16621 373 aaPredicted RBP17■□□□□ 0.31
HERPUD1-215ENST00000568676 SV2CQ496J9 727 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 PLA2G2CQ5R387 149 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 FSTL4Q6MZW2 842 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 MRPS31Q92665 395 aaKnown RBP17■□□□□ 0.31
HERPUD1-215ENST00000568676 ZNF560Q96MR9 790 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
HERPUD1-215ENST00000568676 ST6GALNAC4Q9H4F1 302 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 DPP3Q9NY33 737 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 KIF26AQ9ULI4 1882 aaPredicted RBP17■□□□□ 0.31
HERPUD1-215ENST00000568676 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
HERPUD1-215ENST00000568676 TBCAO75347 108 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 BMP15O95972 392 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 F11P03951 625 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 ELF2Q15723 593 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 STPG1Q5TH74 334 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 KBTBD6Q86V97 674 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 C11orf74Q86VG3 221 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 MON1AQ86VX9 555 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 MAB21L3Q8N8X9 362 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 GIPC2Q8TF65 315 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 ABCB6Q9NP58 842 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 ABI2Q9NYB9 513 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-215ENST00000568676 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 RHOBTB1O94844 696 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 IL18RAPO95256 599 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 SEC24BO95487 1268 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms