RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 C4orf47A7E2U8 309 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 LACTBL1A8MY62 500 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 APBB3O95704 486 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 CYP11A1P05108 521 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 DDX6P26196 483 aaKnown RBP eCLIP12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 TNFSF9P41273 254 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 GUCY2FP51841 1108 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 LILRA4P59901 499 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 CREB5Q02930 508 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 ST3GAL1Q11201 340 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 BFSP1Q12934 665 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 COL9A2Q14055 689 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 NBR1Q14596 966 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 SENP8Q96LD8 212 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 HAPLN2Q9GZV7 340 aa12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 LNP1A1A4G5 178 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 BCLAF3A2AJT9 711 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 PP2D1A8MPX8 630 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 H0YCG3 227 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 PPEF2O14830 753 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 GIPC1O14908 333 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 RAD51AP2Q09MP3 1159 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 FOXC1Q12948 553 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 ENOX2Q16206 610 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 SH3PXD2AQ5TCZ1 1133 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 CC2D1AQ6P1N0 951 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 C11orf74Q86VG3 221 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 MAB21L3Q8N8X9 362 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 RPLP0P6Q8NHW5 317 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 USP13Q92995 863 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 ACDQ96AP0 544 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 P2RY13Q9BPV8 354 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 ZCWPW1Q9H0M4 648 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 RPF1Q9H9Y2 349 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 POLR3BQ9NW08 1133 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 EBF1Q9UH73 591 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 DSEQ9UL01 958 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
GTF3C1-209ENST00000568569 NUP210Q8TEM1 1887 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 LAD1O00515 517 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 DCLK1O15075 740 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 OGTO15294 1046 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 ADRB2P07550 413 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 ARSAP15289 507 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 CDC25AP30304 524 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 GBP1P32455 592 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 LIG4P49917 911 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 NEK4P51957 841 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 NLRP12P59046 1061 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 DMC1Q14565 340 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 PDGFRLQ15198 375 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 C9orf57Q5W0N0 161 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 CD302Q8IX05 232 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 KCNN1Q92952 543 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 FBRSL1Q9HCM7 1045 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 KCND2Q9NZV8 630 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
GTF3C1-209ENST00000568569 SOBPA7XYQ1 873 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 KHNYNO15037 678 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 FAM189A1O60320 539 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 HAPLN1P10915 354 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 CEACAM1P13688 526 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 GJA4P35212 333 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 PRPHP41219 470 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 GALK1P51570 392 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 CDR1P51861 262 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 NCKAP1LP55160 1127 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 ZNF268Q14587 947 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 JADE1Q6IE81 842 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 DTHD1Q6ZMT9 781 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 METTL23Q86XA0 190 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 KCTD17Q8N5Z5 321 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 MRPS31Q92665 395 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 MMTAG2Q9BU76 263 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms