RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	GBP2	P32456	591 aa	Predicted RBP	13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	MYL6	P60660	151 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	FKBP3	Q00688	224 aa	Known RBP	13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	TWF1	Q12792	350 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	PTPN21	Q16825	1174 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	EDRF1	Q3B7T1	1238 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	SLC39A12	Q504Y0	691 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	C1orf220	Q5T0J3	134 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	KLHL10	Q6JEL2	608 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	FOXR2	Q6PJQ5	311 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	GET4	Q7L5D6	327 aa	Predicted RBP	13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	DPH6	Q7L8W6	267 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	LIMS2	Q7Z4I7	341 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	OSTM1	Q86WC4	334 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	TMEM86A	Q8N2M4	240 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	ATAD1	Q8NBU5	361 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	ITFG1	Q8TB96	612 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	TMC2	Q8TDI7	906 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	DDX43	Q9NXZ2	648 aa	Known RBP	13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	CEP72	Q9P209	647 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	RWDD2A	Q9UIY3	292 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	GABRD	O14764	452 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	MAPK13	O15264	365 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	HCRT	O43612	131 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	PHACTR2	O75167	634 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	GNA14	O95837	355 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	ASGR2	P07307	311 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	TPM2	P07951	284 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	RHO	P08100	348 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	LAMP2	P13473	410 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	BMP6	P22004	513 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	ACAT1	P24752	427 aa	Known RBP	13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	VAMP7	P51809	220 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	AP3M2	P53677	418 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	ZXDA	P98168	799 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	TRPC3	Q13507	836 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	PABPC1L	Q4VXU2	614 aa	Known RBP	13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	TDRD10	Q5VZ19	366 aa	Known RBP	13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	ANKRD40	Q6AI12	368 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	FAM114A1	Q8IWE2	563 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	TTC9B	Q8N6N2	239 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	ANKRD20A12P	Q8NF67	263 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	NELFB	Q8WX92	580 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	EDA	Q92838	391 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	EEF2KMT	Q96G04	330 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	ACBD6	Q9BR61	282 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	C1QTNF1	Q9BXJ1	281 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	XYLT2	Q9H1B5	865 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	TMLHE	Q9NVH6	421 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	EPS15L1	Q9UBC2	864 aa		13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.19	□□□□□ -0.3
SCAPER-219	ENST00000568382	FAM86C2P	A6NEL3	165 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	PPP1R3G	B7ZBB8	358 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	IKBKB	O14920	756 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	GPR37L1	O60883	481 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	SOAT2	O75908	522 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	VNN1	O95497	513 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	STAU1	O95793	577 aa	Known RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	LMO2	P25791	158 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	ATIC	P31939	592 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	PSMC2	P35998	433 aa	Known RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	LHX1	P48742	406 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	CLCN6	P51797	869 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	PMS1	P54277	932 aa	Known RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	MCCD1	P59942	119 aa	Predicted RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	MYL7	Q01449	175 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	BIRC3	Q13489	604 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	SLC5A9	Q2M3M2	681 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	WDR72	Q3MJ13	1102 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	SV2A	Q7L0J3	742 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	FAM186B	Q8IYM0	893 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	DCP1B	Q8IZD4	617 aa	Known RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	ADGRF2	Q8IZF7	708 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	HS6ST3	Q8IZP7	471 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	SPATA18	Q8TC71	538 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	KBTBD7	Q8WVZ9	684 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	FGF13	Q92913	245 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	ELMO3	Q96BJ8	720 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	ZNF512	Q96ME7	567 aa	Predicted RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	CEP63	Q96MT8	703 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	MMS19	Q96T76	1030 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	PKMYT1	Q99640	499 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	CORO1B	Q9BR76	489 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	DNAJC25	Q9H1X3	360 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	SMOC2	Q9H3U7	446 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	TSPY26P	Q9H489	355 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	KCNK12	Q9HB15	430 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	AVEN	Q9NQS1	362 aa	Predicted RBP	13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	HSFX1	Q9UBD0	423 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	CDH7	Q9ULB5	785 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	YIPF1	Q9Y548	306 aa		13.18	□□□□□ -0.3
SCAPER-219	ENST00000568382	TRIM49B	A6NDI0	452 aa		13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	GOLGA6L19	H0YKK7	550 aa		13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	KRT13	P13646	458 aa		13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	TUFM	P49411	452 aa	Known RBP	13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	ZNF165	P49910	485 aa		13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	EPHB3	P54753	998 aa		13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	PPP3CA	Q08209	521 aa		13.17	□□□□□ -0.3
SCAPER-219	ENST00000568382	SMARCB1	Q12824	385 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms