RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 GPR179Q6PRD1 2367 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 ZNF292O60281 2723 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 ATP2C2O75185 946 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 RHOBTB3O94955 611 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 LMNAP02545 664 aaKnown RBP10.22□□□□□ -0.77
SF3B3-211ENST00000568291 TNNC2P02585 160 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 LRG1P02750 347 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 NR3C1P04150 777 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 RHOP08100 348 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 MYL4P12829 197 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 TYMPP19971 482 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 LMO2P25791 158 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 HOXA9P31269 272 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 CCR2P41597 374 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 FAM160A1Q05DH4 1040 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 DUOXA2Q1HG44 320 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 SOWAHAQ2M3V2 549 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 PABPC1LQ4VXU2 614 aaKnown RBP10.22□□□□□ -0.77
SF3B3-211ENST00000568291 SDHAF4Q5VUM1 108 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 PARM1Q6UWI2 310 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 MTSS1LQ765P7 747 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 ERMP1Q7Z2K6 904 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 TRAPPC11Q7Z392 1133 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 METTL23Q86XA0 190 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 TCEAL8Q8IYN2 117 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 GIPC2Q8TF65 315 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 FGF13Q92913 245 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 FGF14Q92915 247 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 HPDLQ96IR7 371 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 ANKRD36BP1Q96IX9 119 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 FNBP1Q96RU3 617 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 TSPAN18Q96SJ8 248 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 SEMA4AQ9H3S1 761 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 DMAC2Q9NW81 257 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 DLGAP2Q9P1A6 1054 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 AFF4Q9UHB7 1163 aaKnown RBP10.22□□□□□ -0.77
SF3B3-211ENST00000568291 SIT1Q9Y3P8 196 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 PCDHA5Q9Y5H7 936 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 TICRRQ7Z2Z1 1910 aa10.22□□□□□ -0.77
SF3B3-211ENST00000568291 COL4A2P08572 1712 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 F5P12259 2224 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 MTMR11A4FU01 709 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 OR6C75A6NL08 312 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 BIN1O00499 593 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 KIAA0391O15091 583 aaKnown RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 LRRN2O75325 713 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 CLSTN1O94985 981 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 CYP11A1P05108 521 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 PDGFRBP09619 1106 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 SP9P0CG40 484 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 CEBPBP17676 345 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 PRCPP42785 496 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 GPR15P49685 360 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 MYL6P60660 151 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 POU5F1Q01860 360 aaKnown RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 GPR17Q13304 367 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 PSMD6Q15008 389 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 UVSSAQ2YD98 709 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 SV2CQ496J9 727 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 TPGS2Q68CL5 300 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 CENPPQ6IPU0 288 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 WDR49Q8IV35 697 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 ZSWIM3Q96MP5 696 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 MMS19Q96T76 1030 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 CGRRF1Q99675 332 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 SEPT5Q99719 369 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 HINFPQ9BQA5 517 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 KXD1Q9BQD3 176 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 MRPL45Q9BRJ2 306 aaKnown RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 PI4K2AQ9BTU6 479 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 ZCWPW1Q9H0M4 648 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 MMRN2Q9H8L6 949 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 KIAA1586Q9HCI6 787 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 ABI2Q9NYB9 513 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 GTF3C4Q9UKN8 822 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 ITGA11Q9UKX5 1188 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 MRPS23Q9Y3D9 190 aaKnown RBP10.21□□□□□ -0.77
SF3B3-211ENST00000568291 YIPF1Q9Y548 306 aa10.21□□□□□ -0.77
SF3B3-211ENST00000568291 UBE4BO95155 1302 aa10.21□□□□□ -0.78
SF3B3-211ENST00000568291 DMDP11532 3685 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 ARHGEF37A1IGU5 675 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PDXKO00764 312 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 HUS1O60921 280 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PHACTR2O75167 634 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PRPF40AO75400 957 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 AKAP3O75969 853 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 MYL1P05976 194 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 POU2F2P09086 479 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 TRIM49P0CI25 452 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 TRIM49CP0CI26 452 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 GLULP15104 373 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PTPN2P17706 415 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 ANP32AP39687 249 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 RAP1GAPP47736 663 aa10.2□□□□□ -0.78
SF3B3-211ENST00000568291 PMS1P54277 932 aaKnown RBP10.2□□□□□ -0.78
SF3B3-211ENST00000568291 CDH8P55286 799 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms