RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 SLC8B1Q6J4K2 584 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.28
SPG7-218ENST00000568205 WHAMMQ8TF30 809 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 SHC3Q92529 594 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 TWNKQ96RR1 684 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 SYT15Q9BQS2 421 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 ACBD6Q9BR61 282 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 EMILIN2Q9BXX0 1053 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 HMGXB4Q9UGU5 601 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 ADAM12O43184 909 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 TRIM21P19474 475 aaKnown RBP16.76■□□□□ 0.27
SPG7-218ENST00000568205 OR1D2P34982 312 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 NDUFV1P49821 464 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 FXR1P51114 621 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPG7-218ENST00000568205 TSPY1Q01534 308 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 INTS6LQ5JSJ4 861 aaKnown RBP16.76■□□□□ 0.27
SPG7-218ENST00000568205 SMYD5Q6GMV2 418 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 VSTM4Q8IW00 320 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 MRFAP1L1Q96HT8 127 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 KLHL5Q96PQ7 755 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 TMEM209Q96SK2 561 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 NT5C1AQ9BXI3 368 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 STK33Q9BYT3 514 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 ZCWPW1Q9H0M4 648 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 LMCD1Q9NZU5 365 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 CEP72Q9P209 647 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 CDH9Q9ULB4 789 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
SPG7-218ENST00000568205 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 ADH1AP07327 375 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 OR4Q2P0C623 313 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 KRT5P13647 590 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 CPB1P15086 417 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 ARPP19P56211 112 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 PSMC1P62191 440 aaKnown RBP16.75■□□□□ 0.27
SPG7-218ENST00000568205 ROR1Q01973 937 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 ORC1Q13415 861 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 RAB33AQ14088 237 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 ADGRE1Q14246 886 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
SPG7-218ENST00000568205 FIGNQ5HY92 759 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 Q7L0L9 218 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 GLYCTKQ8IVS8 523 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 DCP1BQ8IZD4 617 aaKnown RBP16.75■□□□□ 0.27
SPG7-218ENST00000568205 RBBP8NLQ8NC74 664 aaPredicted RBP16.75■□□□□ 0.27
SPG7-218ENST00000568205 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 NUP58Q9BVL2 599 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 DNAI2Q9GZS0 605 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 NLRC4Q9NPP4 1024 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 CRTAC1Q9NQ79 661 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 CNTN6Q9UQ52 1028 aa16.75■□□□□ 0.27
SPG7-218ENST00000568205 ATP2C2O75185 946 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 PTPN1P18031 435 aaKnown RBP16.74■□□□□ 0.27
SPG7-218ENST00000568205 POU3F3P20264 500 aaPredicted RBP16.74■□□□□ 0.27
SPG7-218ENST00000568205 ZNF132P52740 706 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 RAD23BP54727 409 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 CCDC142Q17RM4 750 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 SPECC1LQ69YQ0 1117 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 ACOT1Q86TX2 421 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 LRRTM3Q86VH5 581 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 CRYBG2Q8N1P7 616 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 SLC4A11Q8NBS3 891 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 B3GALNT2Q8NCR0 500 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 PPP2R3CQ969Q6 453 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 GAS2L1Q99501 681 aaPredicted RBP16.74■□□□□ 0.27
SPG7-218ENST00000568205 PKMYT1Q99640 499 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 EDEM3Q9BZQ6 932 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 NSUN3Q9H649 340 aaKnown RBP16.74■□□□□ 0.27
SPG7-218ENST00000568205 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 TSC2P49815 1807 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 COL4A4P53420 1690 aaPredicted RBP16.74■□□□□ 0.27
SPG7-218ENST00000568205 VWA8A3KMH1 1905 aa16.74■□□□□ 0.27
SPG7-218ENST00000568205 WDR27A2RRH5 827 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 MYBPHLA2RUH7 354 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 F8VZ95 297 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
SPG7-218ENST00000568205 CLASP2O75122 1294 aaKnown RBP16.73■□□□□ 0.27
SPG7-218ENST00000568205 PNMA6AP0CW24 399 aaPredicted RBP16.73■□□□□ 0.27
SPG7-218ENST00000568205 KLRC2P26717 231 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 USP8P40818 1118 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 JAM2P57087 298 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 GPR17Q13304 367 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 SLC39A12Q504Y0 691 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 MDH1BQ5I0G3 518 aa16.73■□□□□ 0.27
SPG7-218ENST00000568205 FAM171BQ6P995 826 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms