RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.65■■□□□ 1.54
LINC00543-201ENST00000567234 LHX5Q9H2C1 402 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 MTUS1Q9ULD2 1270 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 POLIQ9UNA4 740 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 UTP11Q9Y3A2 253 aaKnown RBP24.65■■□□□ 1.54
LINC00543-201ENST00000567234 CYP2C9P11712 490 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 CYP1B1Q16678 543 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 FEZF2Q8TBJ5 459 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 KATNAL1Q9BW62 490 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 FAM114A2Q9NRY5 505 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 TRIP12Q14669 1992 aaPredicted RBP24.64■■□□□ 1.54
LINC00543-201ENST00000567234 NDUFAB1O14561 156 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 TTI1O43156 1089 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 AXLP30530 894 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 HOXA11P31270 313 aaPredicted RBP24.64■■□□□ 1.54
LINC00543-201ENST00000567234 FCGRTP55899 365 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 RBP5P82980 135 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 TAP1Q03518 808 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 SLC27A1Q6PCB7 646 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 CPNE8Q86YQ8 564 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 FAM49AQ9H0Q0 323 aaPredicted RBP24.64■■□□□ 1.54
LINC00543-201ENST00000567234 ACTR5Q9H9F9 607 aaPredicted RBP24.64■■□□□ 1.54
LINC00543-201ENST00000567234 ERVK-5Q9HDB9 667 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 PCYOX1Q9UHG3 505 aa24.64■■□□□ 1.54
LINC00543-201ENST00000567234 PSTPIP1O43586 416 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 DARSP14868 501 aaKnown RBP24.63■■□□□ 1.53
LINC00543-201ENST00000567234 DR1Q01658 176 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 ZNF394Q53GI3 561 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 AADACL2Q6P093 401 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 CATSPER4Q7RTX7 472 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 PRELID2Q8N945 189 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 GPATCH11Q8N954 259 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 MAIP1Q8WWC4 291 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 TFAP2BQ92481 460 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 TRIM7Q9C029 511 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 DPP3Q9NY33 737 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 IP6K2Q9UHH9 426 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 SP3Q02447 781 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 NOTUMQ6P988 496 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 ZBTB9Q96C00 473 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 HPDLQ96IR7 371 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 EPN3Q9H201 632 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 PLEKHA4Q9H4M7 779 aa24.63■■□□□ 1.53
LINC00543-201ENST00000567234 TCRBV5S1A1TA0A578 114 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 FSCN2O14926 492 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 TLR3O15455 904 aaKnown RBP24.62■■□□□ 1.53
LINC00543-201ENST00000567234 POLR2BP30876 1174 aaKnown RBP24.62■■□□□ 1.53
LINC00543-201ENST00000567234 SSTR3P32745 418 aaPredicted RBP24.62■■□□□ 1.53
LINC00543-201ENST00000567234 RAD23BP54727 409 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 C2CD6Q53TS8 623 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 C12orf50Q8NA57 414 aaPredicted RBP24.62■■□□□ 1.53
LINC00543-201ENST00000567234 P3H4Q92791 437 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 RASAL2Q9UJF2 1139 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 STRIP2Q9ULQ0 834 aa24.62■■□□□ 1.53
LINC00543-201ENST00000567234 ANKRD65E5RJM6 399 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 CILPO75339 1184 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 ECHS1P30084 290 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 RDXP35241 583 aaKnown RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 DRG2P55039 364 aaKnown RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 PRKCZQ05513 592 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 TRADDQ15628 312 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 LLGL2Q6P1M3 1020 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 ADAT2Q7Z6V5 191 aaKnown RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 RHOT1Q8IXI2 618 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 WDTC1Q8N5D0 677 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 RIN2Q8WYP3 895 aaPredicted RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 CFHR5Q9BXR6 569 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 SDCBP2Q9H190 292 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 AGAP1Q9UPQ3 857 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 TMEM191CA6NGB0 347 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 NPTXRO95502 500 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 FAM153BP0C7A2 387 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 FLT3LGP49771 235 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 HLTFQ14527 1009 aaKnown RBP eCLIP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 FAM153CQ494X1 144 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 PREPLQ4J6C6 727 aaPredicted RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 PHLDB2Q86SQ0 1253 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 ERICH1Q86X53 443 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 NME8Q8N427 588 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 MAGOHBQ96A72 148 aaKnown RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 KIF12Q96FN5 646 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 DDX27Q96GQ7 796 aaKnown RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 ERP44Q9BS26 406 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 CELF4Q9BZC1 486 aaKnown RBP24.61■■□□□ 1.53
LINC00543-201ENST00000567234 FAM153AQ9UHL3 310 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 CAPN7Q9Y6W3 813 aa24.61■■□□□ 1.53
LINC00543-201ENST00000567234 PDCD11Q14690 1871 aaKnown RBP24.6■■□□□ 1.53
LINC00543-201ENST00000567234 H0YHG0 523 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 PODXLO00592 558 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 KPNA6O60684 536 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 MYL3P08590 195 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 GNAT1P11488 350 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 FGFR4P22455 802 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 HOXC8P31273 242 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 HSPA9P38646 679 aaKnown RBP24.6■■□□□ 1.53
LINC00543-201ENST00000567234 RAP1GAPP47736 663 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 INCA1Q0VD86 236 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 SIX1Q15475 284 aaPredicted RBP24.6■■□□□ 1.53
LINC00543-201ENST00000567234 DUPD1Q68J44 220 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 RUFY4Q6ZNE9 571 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms