RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ADSSP30520 456 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 CIITAP33076 1130 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 GJA4P35212 333 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 AVPR1AP37288 418 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 CLCNKBP51801 687 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 UCNP55089 124 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 SEC13P55735 322 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 NPEPPSP55786 919 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 MBTD1Q05BQ5 628 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 POU5F1BQ06416 359 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 NR1H3Q13133 447 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 LY6DQ14210 128 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 EMC2Q15006 297 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 SMAD1Q15797 465 aaKnown RBP10.62□□□□□ -0.71
CAPN3-216ENST00000567071 CCDC157Q569K6 752 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 SYCP2LQ5T4T6 812 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 CCDC33Q8N5R6 958 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 SNIP1Q8TAD8 396 aaKnown RBP10.62□□□□□ -0.71
CAPN3-216ENST00000567071 RHBDD1Q8TEB9 315 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 HMGB4Q8WW32 186 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 MED8Q96G25 268 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 MTRQ99707 1265 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 ADPGKQ9BRR6 497 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 LRRC3Q9BY71 257 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 KIF9Q9HAQ2 790 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 TBX20Q9UMR3 447 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 A0A1B0GUA9 196 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 OTOL1A6NHN0 477 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-216ENST00000567071 FLRT2O43155 660 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 B4GALT5O43286 388 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 DKK1O94907 266 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 CER1O95813 267 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 ARSAP15289 507 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 CCR10P46092 362 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 TMPRSS3P57727 454 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 ANTXR2P58335 489 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 TLE3Q04726 772 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 NAB2Q15742 525 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 AMHR2Q16671 573 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 UPP1Q16831 310 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 MAP7D1Q3KQU3 841 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 PKDCCQ504Y2 493 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 C4orf17Q53FE4 359 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 GAREM2Q75VX8 874 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 OTUD6AQ7L8S5 288 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 TMPRSS12Q86WS5 348 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-216ENST00000567071 REXO1Q8N1G1 1221 aaKnown RBP10.61□□□□□ -0.71
CAPN3-216ENST00000567071 DEFB119Q8N690 84 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 KRI1Q8N9T8 703 aaKnown RBP10.61□□□□□ -0.71
CAPN3-216ENST00000567071 APPL2Q8NEU8 664 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 SLC5A5Q92911 643 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 MTA3Q9BTC8 594 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 TRIM4Q9C037 500 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 SEMA4CQ9C0C4 833 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 C6orf50Q9HD87 102 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 PDRG1Q9NUG6 133 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 NUB1Q9Y5A7 615 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 SLC12A7Q9Y666 1083 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 ITPR3Q14573 2671 aa10.61□□□□□ -0.71
CAPN3-216ENST00000567071 HELZP42694 1942 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 N4BP3O15049 544 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 PRC1O43663 620 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 ZNF883P0CG24 379 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 JUPP14923 745 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 MCM5P33992 734 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 QARSP47897 775 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 MRPS21P82921 87 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 CYP4F8P98187 520 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 GRIK2Q13002 908 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 SERINC3Q13530 473 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 SUZ12Q15022 739 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 TAF12Q16514 161 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 PPP4R3AQ6IN85 833 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 SYNE3Q6ZMZ3 975 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 Q6ZUG5 572 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 CMTM8Q8IZV2 173 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 FRMD1Q8N878 549 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 FANCBQ8NB91 859 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 FGF11Q92914 225 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 ATP2A3Q93084 1043 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 PSMG2Q969U7 264 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 LENG9Q96B70 501 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 LGMNQ99538 433 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 LARP6Q9BRS8 491 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 SMG9Q9H0W8 520 aaKnown RBP10.6□□□□□ -0.71
CAPN3-216ENST00000567071 ECT2Q9H8V3 914 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
CAPN3-216ENST00000567071 ZBTB24O43167 697 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 TNFSF14O43557 240 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms