RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CBWD3Q5JTY5 395 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 CBWD5Q5RIA9 395 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 ZNF280DQ6N043 979 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 TAS1R2Q8TE23 839 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 DNAI2Q9GZS0 605 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 S1PR5Q9H228 398 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 NDST4Q9H3R1 872 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 CYP3A43Q9HB55 503 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 CBX8Q9HC52 389 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 MTRRQ9UBK8 725 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 VWA8A3KMH1 1905 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 SPTBN4Q9H254 2564 aa17.91■□□□□ 0.46
CLN6-208ENST00000567060 C2orf71A6NGG8 1288 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 OR6C75A6NL08 312 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 GFRA3O60609 400 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 ADH1AP07327 375 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 TKTP29401 623 aaKnown RBP17.9■□□□□ 0.46
CLN6-208ENST00000567060 NOP14P78316 857 aaKnown RBP17.9■□□□□ 0.46
CLN6-208ENST00000567060 SMARCB1Q12824 385 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 KCNC3Q14003 757 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 PSMD5Q16401 504 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 DUSP6Q16828 381 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 RTP2Q5QGT7 225 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 VARS2Q5ST30 1063 aaKnown RBP17.9■□□□□ 0.46
CLN6-208ENST00000567060 CEP57Q86XR8 500 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 THEM5Q8N1Q8 247 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 LNX1Q8TBB1 728 aaPredicted RBP17.9■□□□□ 0.46
CLN6-208ENST00000567060 RIN2Q8WYP3 895 aaPredicted RBP17.9■□□□□ 0.46
CLN6-208ENST00000567060 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 DPP7Q9UHL4 492 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 MAFFQ9ULX9 164 aa17.9■□□□□ 0.46
CLN6-208ENST00000567060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.89■□□□□ 0.45
CLN6-208ENST00000567060 TRIM21P19474 475 aaKnown RBP17.89■□□□□ 0.45
CLN6-208ENST00000567060 TBXAS1P24557 533 aaPredicted RBP17.89■□□□□ 0.45
CLN6-208ENST00000567060 KRT31Q15323 416 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 OVOS1Q6IE37 1185 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 SLC8B1Q6J4K2 584 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 ELMSAN1Q6PJG2 1045 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 GBP6Q6ZN66 633 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 RTL10Q7L3V2 364 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 TAS1R1Q7RTX1 841 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 NIF3L1Q9GZT8 377 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 HSD3B7Q9H2F3 369 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 DAAM1Q9Y4D1 1078 aa17.89■□□□□ 0.45
CLN6-208ENST00000567060 GABRDO14764 452 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 TBC1D4O60343 1298 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 PDGFBP01127 241 aaPredicted RBP17.88■□□□□ 0.45
CLN6-208ENST00000567060 WARSP23381 471 aaKnown RBP17.88■□□□□ 0.45
CLN6-208ENST00000567060 PCSK1P29120 753 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 YWHAEP62258 255 aaKnown RBP17.88■□□□□ 0.45
CLN6-208ENST00000567060 PTPN21Q16825 1174 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 MIIPQ5JXC2 388 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 FKBP15Q5T1M5 1219 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 PLPP4Q5VZY2 271 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 TMEM184AQ6ZMB5 413 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 ADGRF2Q8IZF7 708 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 EHBP1Q8NDI1 1231 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 JAKMIP2Q96AA8 810 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 FAM84AQ96KN4 292 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 NT5C1BQ96P26 610 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 MMS19Q96T76 1030 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 BCO2Q9BYV7 579 aa17.88■□□□□ 0.45
CLN6-208ENST00000567060 WDR87Q6ZQQ6 2873 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 TSC2P49815 1807 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 RIF1Q5UIP0 2472 aaKnown RBP17.87■□□□□ 0.45
CLN6-208ENST00000567060 I3L4J1 428 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 SRGAP2BP0DMP2 458 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 IGFBP6P24592 240 aaPredicted RBP17.87■□□□□ 0.45
CLN6-208ENST00000567060 COPB1P53618 953 aaKnown RBP17.87■□□□□ 0.45
CLN6-208ENST00000567060 EXOC3L4Q17RC7 722 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 SOWAHAQ2M3V2 549 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 FILIP1LQ4L180 1135 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 CTXN3Q4LDR2 81 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 WSCD1Q658N2 575 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 SYCE2Q6PIF2 218 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 ENOSF1Q7L5Y1 443 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 PDCL2Q8N4E4 241 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 HDAC7Q8WUI4 952 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 SEMA4DQ92854 862 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 ATOH1Q92858 354 aaPredicted RBP17.87■□□□□ 0.45
CLN6-208ENST00000567060 KLHL5Q96PQ7 755 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 ACBD6Q9BR61 282 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 L1RE1Q9UN81 338 aa17.87■□□□□ 0.45
CLN6-208ENST00000567060 H0Y858 1186 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 CLSTN1O94985 981 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 CNPP09543 421 aaKnown RBP17.86■□□□□ 0.45
CLN6-208ENST00000567060 RFX1P22670 979 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 GCNT1Q02742 428 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 RAB33AQ14088 237 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 MAPRE1Q15691 268 aaKnown RBP17.86■□□□□ 0.45
CLN6-208ENST00000567060 TPGS2Q68CL5 300 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 LUZP1Q86V48 1076 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 UNC93AQ86WB7 457 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 TMEM130Q8N3G9 435 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 LMO3Q8TAP4 145 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 RIPOR3Q96MK2 946 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 GCNT4Q9P109 453 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 HSFX1Q9UBD0 423 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms