RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 GDAP2Q9NXN4 497 aa20.18■□□□□ 0.82
IFT140-208ENST00000566818 ABI2Q9NYB9 513 aaPredicted RBP20.18■□□□□ 0.82
IFT140-208ENST00000566818 SIT1Q9Y3P8 196 aa20.18■□□□□ 0.82
IFT140-208ENST00000566818 PCDHB5Q9Y5E4 795 aa20.18■□□□□ 0.82
IFT140-208ENST00000566818 SNX9Q9Y5X1 595 aa20.18■□□□□ 0.82
IFT140-208ENST00000566818 CACNA1HO95180 2353 aa20.18■□□□□ 0.82
IFT140-208ENST00000566818 A0A1W2PRU2 124 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 TGFB1I1O43294 461 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 ACTN4O43707 911 aaKnown RBP20.17■□□□□ 0.82
IFT140-208ENST00000566818 PRPF40AO75400 957 aaKnown RBP20.17■□□□□ 0.82
IFT140-208ENST00000566818 SOAT2O75908 522 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 MYL1P05976 194 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 GJA1P17302 382 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 CMA1P23946 247 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 DNAJB7Q7Z6W7 309 aaPredicted RBP20.17■□□□□ 0.82
IFT140-208ENST00000566818 GRAMD1CQ8IYS0 662 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 ADGRF2Q8IZF7 708 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 CXorf38Q8TB03 319 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 ACBD6Q9BR61 282 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 TRMT61BQ9BVS5 477 aaKnown RBP20.17■□□□□ 0.82
IFT140-208ENST00000566818 LRRC3Q9BY71 257 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 PLA2G2FQ9BZM2 168 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 BRD9Q9H8M2 597 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 SIX4Q9UIU6 781 aa20.17■□□□□ 0.82
IFT140-208ENST00000566818 KANSL1LA0AUZ9 987 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 HAPLN1P10915 354 aaPredicted RBP20.16■□□□□ 0.82
IFT140-208ENST00000566818 PCSK1P29120 753 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 CDC25CP30307 473 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 LHX1P48742 406 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 GRM2Q14416 872 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 ANGPT1Q15389 498 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 KNOP1Q1ED39 458 aaKnown RBP20.16■□□□□ 0.82
IFT140-208ENST00000566818 POTEHQ6S545 545 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 OR5B17Q8NGF7 314 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 PAGE5Q96GU1 130 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 HPDLQ96IR7 371 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 FAM84AQ96KN4 292 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 PHOX2BQ99453 314 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 CGRRF1Q99675 332 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 LPIN3Q9BQK8 851 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 FOXQ1Q9C009 403 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 SCAND2PQ9GZW5 306 aaPredicted RBP20.16■□□□□ 0.82
IFT140-208ENST00000566818 ATXN3LQ9H3M9 355 aa20.16■□□□□ 0.82
IFT140-208ENST00000566818 DDX43Q9NXZ2 648 aaKnown RBP20.16■□□□□ 0.82
IFT140-208ENST00000566818 A0A1B0GVL5 298 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 NRG2O14511 850 aaPredicted RBP20.15■□□□□ 0.82
IFT140-208ENST00000566818 CLIC2O15247 247 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 DLATP10515 647 aaKnown RBP20.15■□□□□ 0.82
IFT140-208ENST00000566818 PSMC3P17980 439 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 ATF6P18850 670 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 TNNI1P19237 187 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 GABRR2P28476 465 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 CYP24A1Q07973 514 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 PSMD2Q13200 908 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 BECN1Q14457 450 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 PSMD6Q15008 389 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 INTS6LQ5JSJ4 861 aaKnown RBP20.15■□□□□ 0.82
IFT140-208ENST00000566818 TPRG1Q6ZUI0 275 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 LRRTM3Q86VH5 581 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 C12orf56Q8IXR9 622 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 RDH13Q8NBN7 331 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 IRF7Q92985 503 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 ZSWIM3Q96MP5 696 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 DDX23Q9BUQ8 820 aaKnown RBP20.15■□□□□ 0.82
IFT140-208ENST00000566818 ZNF334Q9HCZ1 680 aaPredicted RBP20.15■□□□□ 0.82
IFT140-208ENST00000566818 ABCB6Q9NP58 842 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 ZDHHC9Q9Y397 364 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 PTPRJQ12913 1337 aa20.15■□□□□ 0.82
IFT140-208ENST00000566818 DCNP07585 359 aaKnown RBP20.14■□□□□ 0.81
IFT140-208ENST00000566818 MAGEA9P43362 315 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 UBXN2BQ14CS0 331 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 VITQ6UXI7 678 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 DPH6Q7L8W6 267 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 YAF2Q8IY57 180 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 CCDC47Q96A33 483 aaKnown RBP20.14■□□□□ 0.81
IFT140-208ENST00000566818 BCO2Q9BYV7 579 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 OSBPL6Q9BZF3 934 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 HPSEQ9Y251 543 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 MRPS17Q9Y2R5 130 aaKnown RBP20.14■□□□□ 0.81
IFT140-208ENST00000566818 MIA3Q5JRA6 1907 aa20.14■□□□□ 0.81
IFT140-208ENST00000566818 DPYSL4O14531 572 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 KLRC4O43908 158 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 EXOC3O60645 756 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 ACAT1P24752 427 aaKnown RBP20.13■□□□□ 0.81
IFT140-208ENST00000566818 GDI1P31150 447 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 NBL1P41271 181 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 VIPR2P41587 438 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 SYKP43405 635 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 RPL10AP62906 217 aaKnown RBP20.13■□□□□ 0.81
IFT140-208ENST00000566818 GPR158Q5T848 1215 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 ZNF852Q6ZMS4 543 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 GAREM2Q75VX8 874 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 TRAPPC11Q7Z392 1133 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 MFSD6LQ8IWD5 586 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 GIPC2Q8TF65 315 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 CCDC127Q96BQ5 260 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 PI4K2AQ9BTU6 479 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 LTB4R2Q9NPC1 389 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 TMLHEQ9NVH6 421 aa20.13■□□□□ 0.81
IFT140-208ENST00000566818 ZMYM5Q9UJ78 669 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms