RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 SLC22A17Q8WUG5 538 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 SEMA4DQ92854 862 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 JAKMIP2Q96AA8 810 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 TNIP3Q96KP6 325 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 ZCWPW1Q9H0M4 648 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 CBX8Q9HC52 389 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 AFF4Q9UHB7 1163 aaKnown RBP21.7■■□□□ 1.06
RNF40-210ENST00000566811 FBXW11Q9UKB1 542 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 DAAM1Q9Y4D1 1078 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 PTPRDP23468 1912 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 BDP1A6H8Y1 2624 aa21.7■■□□□ 1.06
RNF40-210ENST00000566811 PER2O15055 1255 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 ABLIM3O94929 683 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 RPL17P18621 184 aaKnown RBP21.69■■□□□ 1.06
RNF40-210ENST00000566811 RFX1P22670 979 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 TFF2Q03403 129 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 GPR17Q13304 367 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 ADAM15Q13444 863 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 HSP90AA4PQ58FG1 418 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 LIN9Q5TKA1 542 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 SCARA3Q6AZY7 606 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 LILRA6Q6PI73 481 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 CCDC149Q6ZUS6 474 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 EHBP1Q8NDI1 1231 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 PI4K2AQ9BTU6 479 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 HSD3B7Q9H2F3 369 aa21.69■■□□□ 1.06
RNF40-210ENST00000566811 APOBEC3GQ9HC16 384 aaKnown RBP21.69■■□□□ 1.06
RNF40-210ENST00000566811 WDR27A2RRH5 827 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 PES1O00541 588 aaKnown RBP21.68■■□□□ 1.06
RNF40-210ENST00000566811 TGM5O43548 720 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 ATF2P15336 505 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 HOXA9P31269 272 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 GNL1P36915 607 aaPredicted RBP21.68■■□□□ 1.06
RNF40-210ENST00000566811 CUL2Q13617 745 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 UVSSAQ2YD98 709 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 FILIP1LQ4L180 1135 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 INTS6LQ5JSJ4 861 aaKnown RBP21.68■■□□□ 1.06
RNF40-210ENST00000566811 SPOPLQ6IQ16 392 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 CYP26C1Q6V0L0 522 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 SCARA5Q6ZMJ2 495 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 OR10T2Q8NGX3 314 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 LMO3Q8TAP4 145 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 SPPL2BQ8TCT7 592 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 RTP3Q9BQQ7 232 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 RHOBTB2Q9BYZ6 727 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 INTS2Q9H0H0 1204 aaKnown RBP21.68■■□□□ 1.06
RNF40-210ENST00000566811 SMYD3Q9H7B4 428 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 SFXN1Q9H9B4 322 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 ZDHHC7Q9NXF8 308 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 POLIQ9UNA4 740 aa21.68■■□□□ 1.06
RNF40-210ENST00000566811 LGALS16A8MUM7 142 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 A8MXQ7 604 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 POU2F2P09086 479 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 COPB1P53618 953 aaKnown RBP21.67■■□□□ 1.06
RNF40-210ENST00000566811 SKIV2LQ15477 1246 aaKnown RBP21.67■■□□□ 1.06
RNF40-210ENST00000566811 TRIM65Q6PJ69 517 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 RSPO2Q6UXX9 243 aaPredicted RBP21.67■■□□□ 1.06
RNF40-210ENST00000566811 C4orf50Q6ZRC1 276 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 OR6B3Q8NGW1 331 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 HLA-CQ95604 372 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 FUBP3Q96I24 572 aaKnown RBP eCLIP21.67■■□□□ 1.06
RNF40-210ENST00000566811 SYT15Q9BQS2 421 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 IGFLR1Q9H665 355 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 ABCB6Q9NP58 842 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 MAN1C1Q9NR34 630 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 CLDND1Q9NY35 253 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 TAB2Q9NYJ8 693 aa21.67■■□□□ 1.06
RNF40-210ENST00000566811 BARX2Q9UMQ3 279 aaPredicted RBP21.67■■□□□ 1.06
RNF40-210ENST00000566811 PAPLNO95428 1278 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 GLP2RO95838 553 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 HNRNPA1P09651 372 aaKnown RBP eCLIP21.66■■□□□ 1.06
RNF40-210ENST00000566811 ELF1P32519 619 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 KCNQ1P51787 676 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 LUZP1Q86V48 1076 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 PALB2Q86YC2 1186 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 GLYCTKQ8IVS8 523 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 TCEAL8Q8IYN2 117 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 PPM1KQ8N3J5 372 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 KREMEN2Q8NCW0 462 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 CMASQ8NFW8 434 aaPredicted RBP21.66■■□□□ 1.06
RNF40-210ENST00000566811 MRPL45Q9BRJ2 306 aaKnown RBP21.66■■□□□ 1.06
RNF40-210ENST00000566811 UBE2ZQ9H832 354 aaPredicted RBP21.66■■□□□ 1.06
RNF40-210ENST00000566811 APEX2Q9UBZ4 518 aa21.66■■□□□ 1.06
RNF40-210ENST00000566811 ATP8B3O60423 1300 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.65■■□□□ 1.06
RNF40-210ENST00000566811 SPDYE4A6NLX3 237 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 ADAM12O43184 909 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 CILPO75339 1184 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 EPCAMP16422 314 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 PLD1Q13393 1074 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 CFAP221Q4G0U5 840 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 OSTM1Q86WC4 334 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 B3GALNT2Q8NCR0 500 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 NT5C1AQ9BXI3 368 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 VPS16Q9H269 839 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 CISHQ9NSE2 258 aa21.65■■□□□ 1.06
RNF40-210ENST00000566811 MTMR11A4FU01 709 aa21.64■■□□□ 1.05
RNF40-210ENST00000566811 ATP1A3P13637 1013 aa21.64■■□□□ 1.05
RNF40-210ENST00000566811 PON1P27169 355 aa21.64■■□□□ 1.05
RNF40-210ENST00000566811 GTF2F1P35269 517 aaKnown RBP eCLIP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms