RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ZNF236Q9UL36 1845 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 A0A0B4J269 797 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 DNALI1O14645 258 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 LIASO43766 372 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 LGR5O75473 907 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 TJP3O95049 919 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 CALCAP01258 141 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 CALB1P05937 261 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 MMP8P22894 467 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ADORA2AP29274 412 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ARL2P36404 184 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 STAT5BP51692 787 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 TRIP13Q15645 432 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 CCDC142Q17RM4 750 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 LY6KQ17RY6 165 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 NUGGCQ68CJ6 796 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 TMEM270Q6UE05 265 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 HEMGNQ9BXL5 484 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 PHACTR1Q9C0D0 580 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 KCNK9Q9NPC2 374 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ABCF3Q9NUQ8 709 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 GEMIN8Q9NWZ8 242 aaKnown RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 SENP1Q9P0U3 644 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 IVNS1ABPQ9Y6Y0 642 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ADGRA2Q96PE1 1338 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 ATP6V1G2O95670 118 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 STX2P32856 288 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 TCF7P36402 384 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-213ENST00000566756 MAGEA4P43358 317 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 NOP14P78316 857 aaKnown RBP17.7■□□□□ 0.42
CMTM3-213ENST00000566756 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 BNIP1Q12981 228 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 ZNF268Q14587 947 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-213ENST00000566756 TTLL4Q14679 1199 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 LRRC14Q15048 493 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 LLGL1Q15334 1064 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 RNF43Q68DV7 783 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 ARMCX2Q7L311 632 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 MAML1Q92585 1016 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 ELMO3Q96BJ8 720 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 ZNF518BQ9C0D4 1074 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 RXFP1Q9HBX9 757 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 CTNNAL1Q9UBT7 734 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 PTPRJQ12913 1337 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 CNTNAP2Q9UHC6 1331 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 TMEM191CA6NGB0 347 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 K7ERI5 159 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 CREB1P16220 341 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 SKIV2L2P42285 1042 aaKnown RBP17.7■□□□□ 0.42
CMTM3-213ENST00000566756 ACOT2P49753 483 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 WNT7BP56706 349 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 TARBP2Q15633 366 aaKnown RBP17.7■□□□□ 0.42
CMTM3-213ENST00000566756 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 SPOPLQ6IQ16 392 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 FAM167AQ96KS9 214 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 SLITRK1Q96PX8 696 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 RBM15Q96T37 977 aaKnown RBP eCLIP17.7■□□□□ 0.42
CMTM3-213ENST00000566756 GPR20Q99678 358 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 VTA1Q9NP79 307 aa17.7■□□□□ 0.42
CMTM3-213ENST00000566756 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MANSC4A6NHS7 340 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MAGEB2O15479 319 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 UBOX5O94941 541 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 EZRP15311 586 aaKnown RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 GLRA2P23416 452 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MAP2K2P36507 400 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 RFC5P40937 340 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 IL9RQ01113 521 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MPP2Q14168 576 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 GRB14Q14449 540 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MORF4L2Q15014 288 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MTFR1Q15390 333 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 LLGL2Q6P1M3 1020 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MAMDC4Q6UXC1 1216 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 RGS9BPQ6ZS82 235 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 PLPPR4Q7Z2D5 763 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 RASAL3Q86YV0 1011 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 FBXO16Q8IX29 292 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 ALLCQ8N6M5 410 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 NIPA2Q8N8Q9 360 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MGARPQ8TDB4 240 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 TGS1Q96RS0 853 aaKnown RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MYCBPQ99417 103 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 MSTO1Q9BUK6 570 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 HAPLN2Q9GZV7 340 aa17.69■□□□□ 0.42
CMTM3-213ENST00000566756 DDX56Q9NY93 547 aaKnown RBP17.69■□□□□ 0.42
CMTM3-213ENST00000566756 TCRBV5S1A1TA0A578 114 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 RBM47A0AV96 593 aaKnown RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 FAM47DPA6NHR8 397 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 PRPF4O43172 522 aaKnown RBP eCLIP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NCALDP61601 193 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 P3H1Q32P28 736 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 ZPBP2Q6X784 338 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 GSTA5Q7RTV2 222 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms